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Protein
Submitted name:

SEC14 and spectrin domain-containing 1

Gene

Sestd1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
SEC14 and spectrin domain-containing 1Imported
Submitted name:
Sestd1 proteinImported
Gene namesi
Name:Sestd1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1562244 Sestd1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiB5DFL9

Expressioni

Gene expression databases

BgeeiENSRNOG00000012603

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000016837

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 153CRAL-TRIOInterPro annotationAdd BLAST153

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili417 – 437Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4240 Eukaryota
ENOG410XPZN LUCA
GeneTreeiENSGT00730000111148
HOGENOMiHOG000072717
HOVERGENiHBG104429
OMAiCTTRSSG
OrthoDBiEOG091G03F6
TreeFamiTF332003

Family and domain databases

InterProiView protein in InterPro
IPR001251 CRAL-TRIO_dom
PfamiView protein in Pfam
PF13716 CRAL_TRIO_2, 1 hit
PROSITEiView protein in PROSITE
PS50191 CRAL_TRIO, 1 hit

Sequencei

Sequence statusi: Complete.

B5DFL9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEASVILPIL KKKLAFLSGG KDRRSGLILT IPLCLEQTNM DELSVTLDYL
60 70 80 90 100
LSIPSEKCKA RGFTVIVDGR KSQWNVVKTV VLMLQNVVPA EVSLVCVVKP
110 120 130 140 150
DEFWDKKVTH FCFWKEKDRL GFEVILVSAN KLTRYIEPCQ LTEDFGGSLT
160 170 180 190 200
YDHMDWLNKR LVFEKFTKES TSLLDELALI NNGSDKGNEQ EKERSVDLNF
210 220 230 240 250
LPSVDPETVL QTGHELLSEL QQRRFNGSDG GVSWSPMDDE LLAQPQVMKL
260 270 280 290 300
LDSLREQYTR YQEVCRQRSK RTQLEEIQQK VMQVVNWLEG PGSEQLRAQW
310 320 330 340 350
GIGDSIRASQ ALQQKHEEIE SQHSEWFAVY VELNQQIAAL LNAGDEEDLV
360 370 380 390 400
ELKSLQQQLS DVCYRQASQL EFRQNLLQAA LEFHGVAQDL SQQLDGLLGM
410 420 430 440 450
LCVDVAPADG ASIQQTLKLL EEKLKSVDVG LQGLREKGQG LLDQISNQAS
460 470 480 490 500
WAYGKDVTIE NKENVDHIQG VMEDMQLRKQ RCEDMVDVRR LKMLQMVQLF
510 520 530 540 550
KCEEDASQAV EWLSELLDAL LKTHIRLGDD AQETKVLLEK HRKFVDVAQS
560 570 580 590 600
TYDYGRQLLQ ATVVLCQSLR CTSRSSGDTL PRLNRVWKQF TVASEERVHR
610 620 630 640 650
LEMAIAFHSN AEKILQDCPE EPEAMNDEEQ FEEIEAIGKS LLDRLTIPVV
660 670 680 690
YPDGTEQYFG SPSDMASTAE HIRDRMKLVS LKRQQLRHPE MVTTES
Length:696
Mass (Da):79,421
Last modified:October 14, 2008 - v1
Checksum:i874F6E03226F03C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07052587 Genomic DNA No translation available.
BC169110 mRNA Translation: AAI69110.1
RefSeqiNP_001127986.2, NM_001134514.2
XP_006234464.1, XM_006234402.3
XP_006234466.1, XM_006234404.3
XP_008760114.1, XM_008761892.2
XP_008760115.1, XM_008761893.2
UniGeneiRn.18006

Genome annotation databases

EnsembliENSRNOT00000016837; ENSRNOP00000016837; ENSRNOG00000012603
GeneIDi295678
KEGGirno:295678
UCSCiRGD:1562244 rat

Similar proteinsi

Entry informationi

Entry nameiB5DFL9_RAT
AccessioniPrimary (citable) accession number: B5DFL9
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: May 23, 2018
This is version 72 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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