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Protein
Submitted name:

SEC14 and spectrin domain-containing 1

Gene

Sestd1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
SEC14 and spectrin domain-containing 1Imported
Submitted name:
Sestd1 proteinImported
Gene namesi
Name:Sestd1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1562244. Sestd1.

Subcellular locationi

GO - Cellular componenti

Expressioni

Gene expression databases

BgeeiENSRNOG00000012603.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000016837.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 153CRAL-TRIOInterPro annotationAdd BLAST153

Phylogenomic databases

eggNOGiKOG4240. Eukaryota.
ENOG410XPZN. LUCA.
GeneTreeiENSGT00730000111148.
HOGENOMiHOG000072717.
HOVERGENiHBG104429.
OMAiCTTRSSG.
OrthoDBiEOG091G03F6.
TreeFamiTF332003.

Family and domain databases

Gene3Di3.40.525.10. 1 hit.
InterProiView protein in InterPro
IPR001251. CRAL-TRIO_dom.
PfamiView protein in Pfam
PF13716. CRAL_TRIO_2. 1 hit.
PROSITEiView protein in PROSITE
PS50191. CRAL_TRIO. 1 hit.

Sequencei

Sequence statusi: Complete.

B5DFL9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEASVILPIL KKKLAFLSGG KDRRSGLILT IPLCLEQTNM DELSVTLDYL
60 70 80 90 100
LSIPSEKCKA RGFTVIVDGR KSQWNVVKTV VLMLQNVVPA EVSLVCVVKP
110 120 130 140 150
DEFWDKKVTH FCFWKEKDRL GFEVILVSAN KLTRYIEPCQ LTEDFGGSLT
160 170 180 190 200
YDHMDWLNKR LVFEKFTKES TSLLDELALI NNGSDKGNEQ EKERSVDLNF
210 220 230 240 250
LPSVDPETVL QTGHELLSEL QQRRFNGSDG GVSWSPMDDE LLAQPQVMKL
260 270 280 290 300
LDSLREQYTR YQEVCRQRSK RTQLEEIQQK VMQVVNWLEG PGSEQLRAQW
310 320 330 340 350
GIGDSIRASQ ALQQKHEEIE SQHSEWFAVY VELNQQIAAL LNAGDEEDLV
360 370 380 390 400
ELKSLQQQLS DVCYRQASQL EFRQNLLQAA LEFHGVAQDL SQQLDGLLGM
410 420 430 440 450
LCVDVAPADG ASIQQTLKLL EEKLKSVDVG LQGLREKGQG LLDQISNQAS
460 470 480 490 500
WAYGKDVTIE NKENVDHIQG VMEDMQLRKQ RCEDMVDVRR LKMLQMVQLF
510 520 530 540 550
KCEEDASQAV EWLSELLDAL LKTHIRLGDD AQETKVLLEK HRKFVDVAQS
560 570 580 590 600
TYDYGRQLLQ ATVVLCQSLR CTSRSSGDTL PRLNRVWKQF TVASEERVHR
610 620 630 640 650
LEMAIAFHSN AEKILQDCPE EPEAMNDEEQ FEEIEAIGKS LLDRLTIPVV
660 670 680 690
YPDGTEQYFG SPSDMASTAE HIRDRMKLVS LKRQQLRHPE MVTTES
Length:696
Mass (Da):79,421
Last modified:October 14, 2008 - v1
Checksum:i874F6E03226F03C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07052587 Genomic DNA. No translation available.
BC169110 mRNA. Translation: AAI69110.1.
RefSeqiNP_001127986.2. NM_001134514.2.
XP_006234464.1. XM_006234402.3.
XP_006234466.1. XM_006234404.3.
XP_008760114.1. XM_008761892.2.
XP_008760115.1. XM_008761893.2.
UniGeneiRn.18006.

Genome annotation databases

EnsembliENSRNOT00000016837; ENSRNOP00000016837; ENSRNOG00000012603.
GeneIDi295678.
KEGGirno:295678.
UCSCiRGD:1562244. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07052587 Genomic DNA. No translation available.
BC169110 mRNA. Translation: AAI69110.1.
RefSeqiNP_001127986.2. NM_001134514.2.
XP_006234464.1. XM_006234402.3.
XP_006234466.1. XM_006234404.3.
XP_008760114.1. XM_008761892.2.
XP_008760115.1. XM_008761893.2.
UniGeneiRn.18006.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000016837.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000016837; ENSRNOP00000016837; ENSRNOG00000012603.
GeneIDi295678.
KEGGirno:295678.
UCSCiRGD:1562244. rat.

Organism-specific databases

CTDi91404.
RGDi1562244. Sestd1.

Phylogenomic databases

eggNOGiKOG4240. Eukaryota.
ENOG410XPZN. LUCA.
GeneTreeiENSGT00730000111148.
HOGENOMiHOG000072717.
HOVERGENiHBG104429.
OMAiCTTRSSG.
OrthoDBiEOG091G03F6.
TreeFamiTF332003.

Gene expression databases

BgeeiENSRNOG00000012603.

Family and domain databases

Gene3Di3.40.525.10. 1 hit.
InterProiView protein in InterPro
IPR001251. CRAL-TRIO_dom.
PfamiView protein in Pfam
PF13716. CRAL_TRIO_2. 1 hit.
PROSITEiView protein in PROSITE
PS50191. CRAL_TRIO. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB5DFL9_RAT
AccessioniPrimary (citable) accession number: B5DFL9
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: June 7, 2017
This is version 66 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.