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Protein
Submitted name:

Adaptor-related protein complex 3, delta 1 subunit, isoform CRA_b

Gene

Ap3d1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transportSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Adaptor-related protein complex 3, delta 1 subunit, isoform CRA_bImported
Submitted name:
Ap3d1 proteinImported
Submitted name:
Protein Ap3d1Imported
Gene namesi
Name:Ap3d1Imported
ORF Names:rCG_29405Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi1308659. Ap3d1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

MembraneSAAS annotation

PTM / Processingi

PTM databases

PhosphoSiteiB5DFK6.

Expressioni

Gene expression databases

BgeeiENSRNOG00000018977.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
Vps41D3ZVH62EBI-8097016,EBI-10899963

Protein-protein interaction databases

MINTiMINT-8043876.
STRINGi10116.ENSRNOP00000025878.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini32 – 581550Adaptin_NInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1059. Eukaryota.
ENOG410XQFB. LUCA.
GeneTreeiENSGT00550000075067.
HOGENOMiHOG000000981.
HOVERGENiHBG050520.
KOiK12396.
OMAiKMTYDIQ.
OrthoDBiEOG091G04IL.
TreeFamiTF105666.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiIPR010474. AP3D1.
IPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR002553. Clathrin/coatomer_adapt-like_N.
[Graphical view]
PfamiPF01602. Adaptin_N. 1 hit.
PF06375. BLVR. 1 hit.
[Graphical view]
SMARTiSM01354. BLVR. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.

Sequencei

Sequence statusi: Complete.

B5DFK6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALKMVKGSI DRMFDKNLQD LVRGIRNHKE DEAKYISQCI DEIKQELKQD
60 70 80 90 100
NIAVKANAVC KLTYLQMLGY DISWAAFNII EVMSASKFTF KRVGYLAASQ
110 120 130 140 150
CFHEGTDVIM LTTNQIRKDL SSPSQYDTGV ALTGLSCFVT PDLARDLAND
160 170 180 190 200
IMTLMSHTKP YIRKKAVLIM YKVFLKYPES LRPAFPRLKE KLEDPDPGVQ
210 220 230 240 250
SAAVNVICEL ARRNPKNYLS LAPLFFKLMT SSTNNWVLIK IIKLFGALTP
260 270 280 290 300
LEPRLGKKLI EPLTNLIHST SAMSLLYECV NTVIAVLISL SSGMPNHSAS
310 320 330 340 350
IQLCVQKLRI LIEDSDQNLK YLGLLAMSKI LKTHPKSVQS HKDLILQCLD
360 370 380 390 400
DKDESIRLRA LDLLYGMVSK KNLMEIVKKL MTHVDKAEGT TYRDELLTKI
410 420 430 440 450
IDICSQSNYQ HITNFEWYIS ILVELTRLEG TRHGHLIAAQ MLDVAIRVKA
460 470 480 490 500
IRKFAVSQMS SLLDSAHLVA SSTQRNGICE VLYAAAWICG EFSEHLQGPQ
510 520 530 540 550
QTLEAMLRPK VTTLPGHIQA VYVQNVVKLY ASILQQKEQA ADTEGAQEVT
560 570 580 590 600
QLLVERLPQF VQSADLEVQE RASCILQLVK HVQKLQAKGV PVAEEVSALF
610 620 630 640 650
AGELNPVAPK AQKKVPVPEG LDLDAWINEP PSDSESEDEK PKAIFHEEEP
660 670 680 690 700
RHTRRRQPEE DEEELARRRE ARKQEQANNP FYIKSSPSPQ KRYQDAPGVE
710 720 730 740 750
HIPVVQIDLS VPLKVPGMPM SDQYVKLEEQ RRHRQRLEKD KKRKKKEKGK
760 770 780 790 800
RRHSSLPTES DEDIAPAQRV DIITEEMPEN ALPSDEDDKD PNDPYRALDI
810 820 830 840 850
DLDKPLADSE KLPVQKHRNA ETVKSPEKEG VPGVEKKSKK PKKKEKKPKE
860 870 880 890 900
REREKKDKKG EDLDFWLSTT PPPAAAPVPA PSTEGLAASI VTPPKGECEV
910 920 930 940 950
LKGEEPQDEE DHMDHDQERK SSRHKKKKHR KEKEERPRDK KKAKRKQVVQ
960 970 980 990 1000
LENGAPAEEE EEEEEPIPPM SSYCLLAENP YIKVTYDVQA SLQKDSQVTV
1010 1020 1030 1040 1050
SIILENQSSS FLKNMELNVL DSLNTKMARP EGSSVHDGVP VPFQLPPGVS
1060 1070 1080 1090 1100
NEAQFVFTIQ SIVMAQKLKG TLSFIAKDDE GATHEKLDFR LHFSCSSYLI
1110 1120 1130 1140 1150
TTPCYSDAFA KLLESGDLSM NSIKVDGISI SFQNLLAKIC FYHHFSVVER
1160 1170 1180 1190 1200
VDSCASMYSR SIQGHHVCLL VKKGESSVSV DGKCSDATLL SSLLEEMKTT

LSQC
Length:1,204
Mass (Da):135,667
Last modified:October 14, 2008 - v1
Checksum:iA0B52D3203E17BBC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC098115 Genomic DNA. No translation available.
BC169097 mRNA. Translation: AAI69097.1.
CH474029 Genomic DNA. Translation: EDL89243.1.
RefSeqiNP_001094189.1. NM_001100719.1.
UniGeneiRn.8074.

Genome annotation databases

EnsembliENSRNOT00000025878; ENSRNOP00000025878; ENSRNOG00000018977.
GeneIDi314633.
KEGGirno:314633.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC098115 Genomic DNA. No translation available.
BC169097 mRNA. Translation: AAI69097.1.
CH474029 Genomic DNA. Translation: EDL89243.1.
RefSeqiNP_001094189.1. NM_001100719.1.
UniGeneiRn.8074.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-8043876.
STRINGi10116.ENSRNOP00000025878.

PTM databases

PhosphoSiteiB5DFK6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000025878; ENSRNOP00000025878; ENSRNOG00000018977.
GeneIDi314633.
KEGGirno:314633.

Organism-specific databases

CTDi8943.
RGDi1308659. Ap3d1.

Phylogenomic databases

eggNOGiKOG1059. Eukaryota.
ENOG410XQFB. LUCA.
GeneTreeiENSGT00550000075067.
HOGENOMiHOG000000981.
HOVERGENiHBG050520.
KOiK12396.
OMAiKMTYDIQ.
OrthoDBiEOG091G04IL.
TreeFamiTF105666.

Gene expression databases

BgeeiENSRNOG00000018977.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiIPR010474. AP3D1.
IPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR002553. Clathrin/coatomer_adapt-like_N.
[Graphical view]
PfamiPF01602. Adaptin_N. 1 hit.
PF06375. BLVR. 1 hit.
[Graphical view]
SMARTiSM01354. BLVR. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB5DFK6_RAT
AccessioniPrimary (citable) accession number: B5DFK6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: September 7, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.