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Protein
Submitted name:

Tfdp2 protein

Gene

Tfdp2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • heart development Source: RGD
  • mitotic cell cycle Source: InterPro
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-bindingUniRule annotation
Biological processTranscription, Transcription regulationUniRule annotation

Enzyme and pathway databases

ReactomeiR-RNO-1538133. G0 and Early G1.
R-RNO-2173796. SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription.
R-RNO-69231. Cyclin D associated events in G1.

Names & Taxonomyi

Protein namesi
Submitted name:
Tfdp2 proteinImported
Submitted name:
Transcription factor Dp-2Imported
Gene namesi
Name:Tfdp2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 8

Organism-specific databases

RGDi1305814. Tfdp2.

Subcellular locationi

  • Nucleus UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusUniRule annotation

Expressioni

Gene expression databases

BgeeiENSRNOG00000011241.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000015014.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 147E2F_TDPInterPro annotationAdd BLAST82
Domaini154 – 298DPInterPro annotationAdd BLAST145

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili156 – 180Sequence analysisAdd BLAST25

Sequence similaritiesi

Belongs to the E2F/DP family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2829. Eukaryota.
ENOG410Y9QP. LUCA.
GeneTreeiENSGT00390000018222.
HOGENOMiHOG000030696.
HOVERGENiHBG009894.
KOiK09392.

Family and domain databases

CDDicd14458. DP_DD. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR028314. DP-2.
IPR003316. E2F_WHTH_DNA-bd_dom.
IPR014889. Transc_factor_DP_C.
IPR015648. Transcrpt_fac_DP.
IPR011991. WHTH_DNA-bd_dom.
PANTHERiPTHR12548. PTHR12548. 1 hit.
PTHR12548:SF21. PTHR12548:SF21. 1 hit.
PfamiView protein in Pfam
PF08781. DP. 1 hit.
PF02319. E2F_TDP. 1 hit.
PIRSFiPIRSF009404. Transcription_factor_DP. 1 hit.
SMARTiView protein in SMART
SM01138. DP. 1 hit.
SM01372. E2F_TDP. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.

Sequencei

Sequence statusi: Complete.

B5DF82-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIISTPQRIT NSGSVLIGSP YTPAPAMVTQ THIAEAAGWV PSDRKRAREF
60 70 80 90 100
IDSDFSESKR SKKGDKNGKG LRHFSMKVCE KVQRKGTTSY NEVADELVSE
110 120 130 140 150
FTNASNHLAA DSAYDQKNIR RRVYDALNVL MAMNIISKEK KEIKWIGLPT
160 170 180 190 200
NSAQECQNLE IEKQRRIERI KQKRAQLQEL LLQQIAFKNL VQRNRQNEQQ
210 220 230 240 250
NQGPPAVNST IQLPFIVINT SRKTVIDCSI SSDKFEYLFN FDNTFEIHDD
260 270 280 290 300
IEVLKRMGMS FGLESGKCSL EDLKIAKSLV PKALEGYITD VSTGPSWLNQ
310 320 330 340 350
GLLLNSTQSV SNLDPTTGAT VPQSSVNQGL CLDAEVALAT GQFLAPNSHQ
360 370 380
SSTAASQFSE SRGETPCSFN DEEEEDEEED PSSPE
Length:385
Mass (Da):42,857
Last modified:October 14, 2008 - v1
Checksum:iB52EB61392CFE4B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07071195 Genomic DNA. No translation available.
BC168961 mRNA. Translation: AAI68961.1.
RefSeqiNP_001100317.2. NM_001106847.2.
XP_017451079.1. XM_017595590.1.
UniGeneiRn.105731.

Genome annotation databases

EnsembliENSRNOT00000015015; ENSRNOP00000015014; ENSRNOG00000011241.
GeneIDi300947.
KEGGirno:300947.

Similar proteinsi

Entry informationi

Entry nameiB5DF82_RAT
AccessioniPrimary (citable) accession number: B5DF82
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: August 30, 2017
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported