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Protein
Submitted name:

Tfdp2 protein

Gene

Tfdp2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • heart development Source: RGD
  • mitotic cell cycle Source: InterPro
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-bindingUniRule annotation
Biological processTranscription, Transcription regulationUniRule annotation

Enzyme and pathway databases

ReactomeiR-RNO-1538133 G0 and Early G1
R-RNO-2173796 SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
R-RNO-69231 Cyclin D associated events in G1
R-RNO-8953750 Transcriptional Regulation by E2F6

Names & Taxonomyi

Protein namesi
Submitted name:
Tfdp2 proteinImported
Submitted name:
Transcription factor Dp-2Imported
Gene namesi
Name:Tfdp2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 8

Organism-specific databases

RGDi1305814 Tfdp2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Expressioni

Gene expression databases

BgeeiENSRNOG00000011241
ExpressionAtlasiB5DF82 baseline and differential

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000015014

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 147E2F_TDPInterPro annotationAdd BLAST82
Domaini154 – 298DPInterPro annotationAdd BLAST145

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili156 – 180Sequence analysisAdd BLAST25

Sequence similaritiesi

Belongs to the E2F/DP family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2829 Eukaryota
ENOG410Y9QP LUCA
GeneTreeiENSGT00390000018222
HOGENOMiHOG000030696
HOVERGENiHBG009894
KOiK09392

Family and domain databases

CDDicd14458 DP_DD, 1 hit
Gene3Di1.10.10.10, 1 hit
1.20.140.80, 1 hit
InterProiView protein in InterPro
IPR028314 DP-2
IPR037241 E2F-DP_heterodim
IPR003316 E2F_WHTH_DNA-bd_dom
IPR038168 TF_DP_C_sf
IPR014889 Transc_factor_DP_C
IPR015648 Transcrpt_fac_DP
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR12548 PTHR12548, 1 hit
PTHR12548:SF5 PTHR12548:SF5, 1 hit
PfamiView protein in Pfam
PF08781 DP, 1 hit
PF02319 E2F_TDP, 1 hit
PIRSFiPIRSF009404 Transcription_factor_DP, 1 hit
SMARTiView protein in SMART
SM01138 DP, 1 hit
SM01372 E2F_TDP, 1 hit
SUPFAMiSSF144074 SSF144074, 1 hit
SSF46785 SSF46785, 1 hit

Sequencei

Sequence statusi: Complete.

B5DF82-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIISTPQRIT NSGSVLIGSP YTPAPAMVTQ THIAEAAGWV PSDRKRAREF
60 70 80 90 100
IDSDFSESKR SKKGDKNGKG LRHFSMKVCE KVQRKGTTSY NEVADELVSE
110 120 130 140 150
FTNASNHLAA DSAYDQKNIR RRVYDALNVL MAMNIISKEK KEIKWIGLPT
160 170 180 190 200
NSAQECQNLE IEKQRRIERI KQKRAQLQEL LLQQIAFKNL VQRNRQNEQQ
210 220 230 240 250
NQGPPAVNST IQLPFIVINT SRKTVIDCSI SSDKFEYLFN FDNTFEIHDD
260 270 280 290 300
IEVLKRMGMS FGLESGKCSL EDLKIAKSLV PKALEGYITD VSTGPSWLNQ
310 320 330 340 350
GLLLNSTQSV SNLDPTTGAT VPQSSVNQGL CLDAEVALAT GQFLAPNSHQ
360 370 380
SSTAASQFSE SRGETPCSFN DEEEEDEEED PSSPE
Length:385
Mass (Da):42,857
Last modified:October 14, 2008 - v1
Checksum:iB52EB61392CFE4B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07071195 Genomic DNA No translation available.
BC168961 mRNA Translation: AAI68961.1
RefSeqiNP_001100317.2, NM_001106847.2
XP_017451079.1, XM_017595590.1
UniGeneiRn.105731

Genome annotation databases

EnsembliENSRNOT00000015015; ENSRNOP00000015014; ENSRNOG00000011241
GeneIDi300947
KEGGirno:300947

Similar proteinsi

Entry informationi

Entry nameiB5DF82_RAT
AccessioniPrimary (citable) accession number: B5DF82
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: May 23, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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