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Protein
Submitted name:

Vasp protein

Gene

Vasp

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Vasp proteinImported
Gene namesi
Name:VaspImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1311542. Vasp.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiB5DEX4.
PRIDEiB5DEX4.

PTM databases

iPTMnetiB5DEX4.
PhosphoSiteiB5DEX4.

Expressioni

Gene expression databases

GenevisibleiB5DEX4. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000022214.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 114114WH1InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili341 – 36828Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4590. Eukaryota.
ENOG41101TS. LUCA.
HOGENOMiHOG000013015.
HOVERGENiHBG006655.
KOiK06274.
PhylomeDBiB5DEX4.
TreeFamiTF321411.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiIPR011993. PH_dom-like.
IPR017354. Vasodilator_phosphoprotein.
IPR014885. VASP_tetra.
IPR000697. WH1/EVH1_dom.
[Graphical view]
PANTHERiPTHR11202:SF12. PTHR11202:SF12. 1 hit.
PfamiPF08776. VASP_tetra. 1 hit.
PF00568. WH1. 1 hit.
[Graphical view]
PIRSFiPIRSF038010. Vasodilator_Phospo. 1 hit.
SMARTiSM00461. WH1. 1 hit.
[Graphical view]
SUPFAMiSSF50729. SSF50729. 1 hit.
PROSITEiPS50229. WH1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B5DEX4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNETVICSS RATVMLYDDS NKRWLPAGTG PQAFSRVQIY HNPTANSFRV
60 70 80 90 100
VGRKLQPDQQ VVINCAIIRG VKYNQATPIF HQWRDARQVW GLNFGSKEDA
110 120 130 140 150
AQFAIGMANA LEALEGGGPP PAPAPPAWST QNGPSPEELE QQKRQPEHLE
160 170 180 190 200
RRVSNAGGPP APPAGGPPPP PGPPPPPGPP PPPGLPPSGV SGAGHGTGVA
210 220 230 240 250
PPPAPPLPTA QGPSSGGSGA PGLAAAIAGA KLRKVSKEEA SGGPLAPKAE
260 270 280 290 300
NSRGTGGGLM EEMNAMLARR RKATQVGEKP PKDESASQEE SEARIPAQSE
310 320 330 340 350
PVRRPWEKNS TTLPRMKSSS SVTTSEAHPS VPSSSDDSDL ERVKQELVEE
360 370
VRKELQKMKE EIIEVFVQEL RKRGSP
Length:376
Mass (Da):39,724
Last modified:October 14, 2008 - v1
Checksum:i1C082BB7AE1C0DCA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC168841 mRNA. Translation: AAI68841.1.
RefSeqiNP_001101945.2. NM_001108475.2.
UniGeneiRn.98750.

Genome annotation databases

GeneIDi361517.
KEGGirno:361517.
UCSCiRGD:1311542. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC168841 mRNA. Translation: AAI68841.1.
RefSeqiNP_001101945.2. NM_001108475.2.
UniGeneiRn.98750.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000022214.

PTM databases

iPTMnetiB5DEX4.
PhosphoSiteiB5DEX4.

Proteomic databases

PaxDbiB5DEX4.
PRIDEiB5DEX4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi361517.
KEGGirno:361517.
UCSCiRGD:1311542. rat.

Organism-specific databases

CTDi7408.
RGDi1311542. Vasp.

Phylogenomic databases

eggNOGiKOG4590. Eukaryota.
ENOG41101TS. LUCA.
HOGENOMiHOG000013015.
HOVERGENiHBG006655.
KOiK06274.
PhylomeDBiB5DEX4.
TreeFamiTF321411.

Gene expression databases

GenevisibleiB5DEX4. RN.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiIPR011993. PH_dom-like.
IPR017354. Vasodilator_phosphoprotein.
IPR014885. VASP_tetra.
IPR000697. WH1/EVH1_dom.
[Graphical view]
PANTHERiPTHR11202:SF12. PTHR11202:SF12. 1 hit.
PfamiPF08776. VASP_tetra. 1 hit.
PF00568. WH1. 1 hit.
[Graphical view]
PIRSFiPIRSF038010. Vasodilator_Phospo. 1 hit.
SMARTiSM00461. WH1. 1 hit.
[Graphical view]
SUPFAMiSSF50729. SSF50729. 1 hit.
PROSITEiPS50229. WH1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: LungImported.

Entry informationi

Entry nameiB5DEX4_RAT
AccessioniPrimary (citable) accession number: B5DEX4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: June 8, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.