B5DES7 (B5DES7_XENTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA replication complex GINS protein PSF1 EMBL AAI68788.1

Submitted name:
Uncharacterized protein Ensembl ENSXETP00000056696

Gene names

Name:	gins1 Ensembl ENSXETP00000056696 Xenbase XB-GENE-5842214
Synonyms:	psf1 EMBL AAI68788.1

Organism

Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) [Reference proteome]

Taxonomic identifier

8364 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Silurana

Protein attributes

Sequence length	196 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Biological process	DNA replication SAAS SAAS021151
Cellular component	Nucleus SAAS SAAS021151
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5DES7 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: B5923FD3647F1625	FASTA	196	23,117
	10 20 30 40 50 60 MFCEKAIELI RELHRASDGQ LPAFNEDGIR QVLEEMKALY EQNQADVNEA KSEGRSDLIP 70 80 90 100 110 120 TIKFRHCCLL RNRRCIVAYL YDRLLRIRAL RWEYGSVLPN ALRFHMSAEE MDWFNQYKRS 130 140 150 160 170 180 LATYMRSLGG EEGLDITQDM KPPKSLYIEV RCLRDYGEFE IDDGTTILLK KNSQHFLPRW 190 KCEQLIRQGV LEHVLS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	NIH - Xenopus Gene Collection (XGC) project Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Thymus EMBL AAI68788.1.
[2]	NIH - Xenopus Gene Collection (XGC) project Submitted (NOV-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Gastrula EMBL AAI70763.1.
[3]	"The genome of the Western clawed frog Xenopus tropicalis." Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J., Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E., Detter J.C., Fletcher R., Gerhard D.S. , Goodstein D., Graves T., Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M., Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N., Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D., Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B., Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M., Rokhsar D.S. Science 328:633-636(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[4]	Ensembl Submitted (JUN-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAMC01070527 Genomic DNA. No translation available. BC168788 mRNA. Translation: AAI68788.1. BC170763 mRNA. Translation: AAI70763.1. BC170767 mRNA. Translation: AAI70767.1.
RefSeq	NP_001016164.1. NM_001016164.2.
UniGene	Str.20188.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	8364.ENSXETP00000056696.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSXETT00000056696; ENSXETP00000056696; ENSXETG00000027032.
GeneID	548918.
KEGG	xtr:548918.
Organism-specific databases
CTD	9837.
Xenbase	XB-GENE-5842214. gins1.
Phylogenomic databases
eggNOG	COG5230.
GeneTree	ENSGT00390000013968.
HOGENOM	HOG000192102.
HOVERGEN	HBG053743.
KO	K10732.
OMA	WRVGLEL.
OrthoDB	EOG4H19WP.
Family and domain databases
InterPro	IPR021151. GINS_complex. IPR005339. GINS_Psf1. [Graphical view]
PANTHER	PTHR12914. PTHR12914. 1 hit.
Pfam	PF05916. Sld5. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5DES7_XENTR

Accession

Primary (citable) accession number: B5DES7

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	April 3, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)