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Protein
Submitted name:

Ifih1 protein

Gene

Ifih1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi657ZincPROSITE-ProRule annotation1
Metal bindingi660ZincPROSITE-ProRule annotation1
Metal bindingi712ZincPROSITE-ProRule annotation1
Metal bindingi714ZincPROSITE-ProRule annotation1

GO - Molecular functioni

Keywordsi

LigandMetal-bindingPROSITE-ProRule annotation, ZincPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Ifih1 proteinImported
Gene namesi
Name:Ifih1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 259Helicase ATP-bindingInterPro annotationAdd BLAST194
Domaini450 – 622Helicase C-terminalInterPro annotationAdd BLAST173
Domaini643 – 770RLR CTRInterPro annotationAdd BLAST128

Phylogenomic databases

eggNOGiKOG0354 Eukaryota
COG1111 LUCA
HOGENOMiHOG000230992
HOVERGENiHBG106019

Family and domain databases

CDDicd00079 HELICc, 1 hit
Gene3Di2.170.150.30, 1 hit
InterProiView protein in InterPro
IPR006935 Helicase/UvrB_N
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR038557 RLR_C_sf
IPR021673 RLR_CTR
PfamiView protein in Pfam
PF00271 Helicase_C, 1 hit
PF04851 ResIII, 1 hit
PF11648 RIG-I_C-RD, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
PS51789 RLR_CTR, 1 hit

Sequencei

Sequence statusi: Fragment.

B5DEI3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
SVTTESDTSL AEGSVSCFDE SLGHNSNMGR DSGTMGSDSD EDTIMGTKRA
60 70 80 90 100
SPKPELQLRP YQMEVAQPAL DGKNIIICLP TGSGKTRVAV YITKDHLDKK
110 120 130 140 150
KQACESGKVI VLVNKVMLAE QLFRKEFNPF LKKWYRIIGL SGDTQLKISF
160 170 180 190 200
PEVVKSYDVI ISTAQILENS LLNLESGEDD GVQLSDFSLI IIDECHHTNK
210 220 230 240 250
EAVYNNIMRR YLKQKLKNHK LKKQNKPTIH LPQILGLTAS PGVGAAKKQS
260 270 280 290 300
EAEKHILNIC ANLDAFTIKT VKENLSQLKH QIKEPCKKFV IADDTRENPF
310 320 330 340 350
KEKLLEIMAS IQTYCQKSPL SDFGTQHYEQ WAIQMEKKAA KDGNRRDRVC
360 370 380 390 400
AEHLRKYNEA LQINDTIRMI DAYSHLETFY TDEKEKKFAA LNDSDESDDD
410 420 430 440 450
EASSCHDQLK GNVKKSLKLD ETDEFLMNLF FDNKKMLKKL AENPKYENEK
460 470 480 490 500
LIKLRNTILE QFTRSEESSR GIIFTKTRQS TYALSQWIME NEKFAEVGVK
510 520 530 540 550
AHHLIGAGHS SEVKPMTQTE QKEVISKFRT GEINLLIATT VAEEGLDIKE
560 570 580 590 600
CNIVIRYGLV TNEIAMVQAR GRARADESTY VLVTSSGSGV TEREIVNDFR
610 620 630 640 650
EKMMYKAINR VQNMKPEEYA HKILELQVQS ILEKKMKVKR SIARQYNSDP
660 670 680 690 700
SLITLLCKNC STLVCSGENI HVIEKMHHVN MTPEFKGLYI VRENKALQMK
710 720 730 740 750
FADYQTNGEI ICKCGQAWGT MMVHKGLDLP CLKIRNFVVN FKNNSSKKQY
760 770
KKWVELPIRF PDLDCSEYCL YSDED
Length:775
Mass (Da):88,351
Last modified:October 14, 2008 - v1
Checksum:iA748A0F229D5FBD1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC168680 mRNA Translation: AAI68680.1
UniGeneiRn.151974

Similar proteinsi

Entry informationi

Entry nameiB5DEI3_RAT
AccessioniPrimary (citable) accession number: B5DEI3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: March 28, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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