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Protein
Submitted name:

Ifih1 protein

Gene

Ifih1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi657ZincPROSITE-ProRule annotation1
Metal bindingi660ZincPROSITE-ProRule annotation1
Metal bindingi712ZincPROSITE-ProRule annotation1
Metal bindingi714ZincPROSITE-ProRule annotation1

GO - Molecular functioni

Keywordsi

LigandMetal-bindingPROSITE-ProRule annotation, ZincPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Ifih1 proteinImported
Gene namesi
Name:Ifih1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

PTM / Processingi

Proteomic databases

PaxDbiB5DEI3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 259Helicase ATP-bindingInterPro annotationAdd BLAST194
Domaini450 – 622Helicase C-terminalInterPro annotationAdd BLAST173
Domaini643 – 770RLR CTRInterPro annotationAdd BLAST128

Phylogenomic databases

eggNOGiKOG0354. Eukaryota.
COG1111. LUCA.
HOGENOMiHOG000230992.
HOVERGENiHBG106019.

Family and domain databases

InterProiView protein in InterPro
IPR006935. Helicase/UvrB_N.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR021673. RLR_CTR.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF04851. ResIII. 1 hit.
PF11648. RIG-I_C-RD. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51789. RLR_CTR. 1 hit.

Sequencei

Sequence statusi: Fragment.

B5DEI3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
SVTTESDTSL AEGSVSCFDE SLGHNSNMGR DSGTMGSDSD EDTIMGTKRA
60 70 80 90 100
SPKPELQLRP YQMEVAQPAL DGKNIIICLP TGSGKTRVAV YITKDHLDKK
110 120 130 140 150
KQACESGKVI VLVNKVMLAE QLFRKEFNPF LKKWYRIIGL SGDTQLKISF
160 170 180 190 200
PEVVKSYDVI ISTAQILENS LLNLESGEDD GVQLSDFSLI IIDECHHTNK
210 220 230 240 250
EAVYNNIMRR YLKQKLKNHK LKKQNKPTIH LPQILGLTAS PGVGAAKKQS
260 270 280 290 300
EAEKHILNIC ANLDAFTIKT VKENLSQLKH QIKEPCKKFV IADDTRENPF
310 320 330 340 350
KEKLLEIMAS IQTYCQKSPL SDFGTQHYEQ WAIQMEKKAA KDGNRRDRVC
360 370 380 390 400
AEHLRKYNEA LQINDTIRMI DAYSHLETFY TDEKEKKFAA LNDSDESDDD
410 420 430 440 450
EASSCHDQLK GNVKKSLKLD ETDEFLMNLF FDNKKMLKKL AENPKYENEK
460 470 480 490 500
LIKLRNTILE QFTRSEESSR GIIFTKTRQS TYALSQWIME NEKFAEVGVK
510 520 530 540 550
AHHLIGAGHS SEVKPMTQTE QKEVISKFRT GEINLLIATT VAEEGLDIKE
560 570 580 590 600
CNIVIRYGLV TNEIAMVQAR GRARADESTY VLVTSSGSGV TEREIVNDFR
610 620 630 640 650
EKMMYKAINR VQNMKPEEYA HKILELQVQS ILEKKMKVKR SIARQYNSDP
660 670 680 690 700
SLITLLCKNC STLVCSGENI HVIEKMHHVN MTPEFKGLYI VRENKALQMK
710 720 730 740 750
FADYQTNGEI ICKCGQAWGT MMVHKGLDLP CLKIRNFVVN FKNNSSKKQY
760 770
KKWVELPIRF PDLDCSEYCL YSDED
Length:775
Mass (Da):88,351
Last modified:October 14, 2008 - v1
Checksum:iA748A0F229D5FBD1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC168680 mRNA. Translation: AAI68680.1.
UniGeneiRn.151974.

Similar proteinsi

Entry informationi

Entry nameiB5DEI3_RAT
AccessioniPrimary (citable) accession number: B5DEI3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: September 27, 2017
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)