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Protein
Submitted name:

Ifih1 protein

Gene

Ifih1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ifih1 proteinImported
Gene namesi
Name:Ifih1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

PTM / Processingi

Proteomic databases

PaxDbiB5DEI3.

Expressioni

Gene expression databases

BgeeiENSRNOG00000006227.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000009621.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 259Helicase ATP-bindingInterPro annotationAdd BLAST194
Domaini450 – 622Helicase C-terminalInterPro annotationAdd BLAST173

Phylogenomic databases

eggNOGiKOG0354. Eukaryota.
COG1111. LUCA.
HOGENOMiHOG000230992.
HOVERGENiHBG106019.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR006935. Helicase/UvrB_N.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR021673. RIG-I_C-RD.
[Graphical view]
PfamiPF00271. Helicase_C. 1 hit.
PF04851. ResIII. 1 hit.
PF11648. RIG-I_C-RD. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

B5DEI3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
SVTTESDTSL AEGSVSCFDE SLGHNSNMGR DSGTMGSDSD EDTIMGTKRA
60 70 80 90 100
SPKPELQLRP YQMEVAQPAL DGKNIIICLP TGSGKTRVAV YITKDHLDKK
110 120 130 140 150
KQACESGKVI VLVNKVMLAE QLFRKEFNPF LKKWYRIIGL SGDTQLKISF
160 170 180 190 200
PEVVKSYDVI ISTAQILENS LLNLESGEDD GVQLSDFSLI IIDECHHTNK
210 220 230 240 250
EAVYNNIMRR YLKQKLKNHK LKKQNKPTIH LPQILGLTAS PGVGAAKKQS
260 270 280 290 300
EAEKHILNIC ANLDAFTIKT VKENLSQLKH QIKEPCKKFV IADDTRENPF
310 320 330 340 350
KEKLLEIMAS IQTYCQKSPL SDFGTQHYEQ WAIQMEKKAA KDGNRRDRVC
360 370 380 390 400
AEHLRKYNEA LQINDTIRMI DAYSHLETFY TDEKEKKFAA LNDSDESDDD
410 420 430 440 450
EASSCHDQLK GNVKKSLKLD ETDEFLMNLF FDNKKMLKKL AENPKYENEK
460 470 480 490 500
LIKLRNTILE QFTRSEESSR GIIFTKTRQS TYALSQWIME NEKFAEVGVK
510 520 530 540 550
AHHLIGAGHS SEVKPMTQTE QKEVISKFRT GEINLLIATT VAEEGLDIKE
560 570 580 590 600
CNIVIRYGLV TNEIAMVQAR GRARADESTY VLVTSSGSGV TEREIVNDFR
610 620 630 640 650
EKMMYKAINR VQNMKPEEYA HKILELQVQS ILEKKMKVKR SIARQYNSDP
660 670 680 690 700
SLITLLCKNC STLVCSGENI HVIEKMHHVN MTPEFKGLYI VRENKALQMK
710 720 730 740 750
FADYQTNGEI ICKCGQAWGT MMVHKGLDLP CLKIRNFVVN FKNNSSKKQY
760 770
KKWVELPIRF PDLDCSEYCL YSDED
Length:775
Mass (Da):88,351
Last modified:October 14, 2008 - v1
Checksum:iA748A0F229D5FBD1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC168680 mRNA. Translation: AAI68680.1.
UniGeneiRn.151974.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC168680 mRNA. Translation: AAI68680.1.
UniGeneiRn.151974.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000009621.

Proteomic databases

PaxDbiB5DEI3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG0354. Eukaryota.
COG1111. LUCA.
HOGENOMiHOG000230992.
HOVERGENiHBG106019.

Gene expression databases

BgeeiENSRNOG00000006227.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR006935. Helicase/UvrB_N.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR021673. RIG-I_C-RD.
[Graphical view]
PfamiPF00271. Helicase_C. 1 hit.
PF04851. ResIII. 1 hit.
PF11648. RIG-I_C-RD. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB5DEI3_RAT
AccessioniPrimary (citable) accession number: B5DEI3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: September 7, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.