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Protein
Submitted name:

RGD1310159 protein

Gene

RGD1310159

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
RGD1310159 proteinImported
Gene namesi
Name:RGD1310159Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Structurei

3D structure databases

ProteinModelPortaliB5DEF6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini290 – 503APHInterPro annotationAdd BLAST214
Domaini664 – 786Acyl-CoA_dh_NInterPro annotationAdd BLAST123
Domaini791 – 892Acyl-CoA_dh_MInterPro annotationAdd BLAST102
Domaini904 – 1052Acyl-CoA_dh_1InterPro annotationAdd BLAST149

Phylogenomic databases

eggNOGiKOG1469 Eukaryota
KOG3085 Eukaryota
COG3173 LUCA
HOGENOMiHOG000131660
HOVERGENiHBG057142
PhylomeDBiB5DEF6

Family and domain databases

Gene3Di1.10.150.240, 1 hit
1.10.540.10, 1 hit
3.40.50.1000, 2 hits
InterProiView protein in InterPro
IPR006091 Acyl-CoA_Oxase/DH_cen-dom
IPR036250 AcylCo_DH-like_C
IPR009075 AcylCo_DH/oxidase_C
IPR013786 AcylCoA_DH/ox_N
IPR037069 AcylCoA_DH/ox_N_sf
IPR009100 AcylCoA_DH/oxidase_NM_dom
IPR002575 Aminoglycoside_PTrfase
IPR036412 HAD-like_sf
IPR006439 HAD-SF_hydro_IA
IPR011945 HAD-SF_ppase_IA/epoxid_hydro_N
IPR023214 HAD_sf
IPR011009 Kinase-like_dom_sf
IPR023198 PGP-like_dom2
PfamiView protein in Pfam
PF00441 Acyl-CoA_dh_1, 1 hit
PF02770 Acyl-CoA_dh_M, 1 hit
PF02771 Acyl-CoA_dh_N, 1 hit
PF01636 APH, 1 hit
PRINTSiPR00413 HADHALOGNASE
SUPFAMiSSF47203 SSF47203, 1 hit
SSF56112 SSF56112, 1 hit
SSF56645 SSF56645, 1 hit
SSF56784 SSF56784, 1 hit
TIGRFAMsiTIGR02247 HAD-1A3-hyp, 1 hit
TIGR01509 HAD-SF-IA-v3, 1 hit

Sequencei

Sequence statusi: Complete.

B5DEF6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCIRRLFQPS SIHWAWRTTA PKHPLSRHQG IPRWTYSRGR SYRAVIFDMG
60 70 80 90 100
GVLMPSPGTV AAGWEVQNHV PPGTIMKALI RGGDSGPWMR FMKGEMTMER
110 120 130 140 150
FLEEFGRLCS EIAKTSVPVS SFFSLLTSEH VAKQFPVMTQ AVSQIRAEGL
160 170 180 190 200
QTAVLTNNFL LSNGKSFLPL DRKQFDVVVE SCVEGVCKPD PRIFQLCLQR
210 220 230 240 250
LNLQPSQAIF LDDLGPNVKV AASLGIRTIK VDNPETAVKE LEDLLGFPLH
260 270 280 290 300
GGVPNTRPVR KTMEIPQDAL ETYLKGLLGT RYTGPMKLLQ FDHGQSNPTY
310 320 330 340 350
YIRLADRQLV LRKKPPGTLL PSAHAIEREF RIMKALGDAG VPVPTVLDLC
360 370 380 390 400
SDSSIIGTPF YLMEYCPGII YKDPSLPGLE PSRREAIYTA MNQVLCRIHS
410 420 430 440 450
VDLQATGLDG FGKQGDYISR QVQTWTKQYR AAETSSIPAM ERLIQWLPLH
460 470 480 490 500
LPQQQRTTVV HGDFRLDNLM FRPEKAEVLA VLDWELSTLG DPFADVAYSC
510 520 530 540 550
LAHYLPSSFP MLRGFRDQDV RELGIPTVEE YFRMYCLNMG IPPIDNWNFY
560 570 580 590 600
MAFSFFRVAA ILQGVYKRLL TGQASSATAG QSGKLTESMA ELAWDFAIKE
610 620 630 640 650
GFRVFKAMPA TTTLTRSYHA WAGPRLPRTP TGSRSHSTTV AASPSHEAKG
660 670 680 690 700
GLIISPEGLS PRVRKLYDQL LQFMEQKVYP VETELQRHQA SADRWSPSPL
710 720 730 740 750
IEDLKEKAQA EGLWNLFLPL ETDPERKYGA GLTNVEYAHL CEVMGMSLYA
760 770 780 790 800
SEIFNCSAPD TGNMEILVRY GTEEQKARWL APLLEGRIRS CFAMTEPQVA
810 820 830 840 850
SSDASNIEAS IKEEDGSYVI NGHKWWISGI LDPRCKLCVF MGKTDPQAPR
860 870 880 890 900
HQQQSMLLVP MDTPGIKVIR PLSVFGLEDP PGGHGEVQFK DVRVPKENIL
910 920 930 940 950
LGPGRGFEIA QGRLGPGRIH HCMRLIGYSE RALELMKTRV MSRTAFGKPL
960 970 980 990 1000
VEHGTILADI ARSRVDIEQA RLLVLKAAHL MDVAGNKAAA LEIAMIKMVA
1010 1020 1030 1040 1050
PSMAYRVIDR AVQAFGAAGL SSDYPLAQFF GWARALRFAD GPDEVHQLTV
1060
AKMELKGRSR LQEPAAPRV
Length:1,069
Mass (Da):119,270
Last modified:October 14, 2008 - v1
Checksum:iED8B9F3852F1166A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC168650 mRNA Translation: AAI68650.1
UniGeneiRn.13452

Genome annotation databases

UCSCiRGD:1310159 rat

Similar proteinsi

Entry informationi

Entry nameiB5DEF6_RAT
AccessioniPrimary (citable) accession number: B5DEF6
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: May 23, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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