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B5DE51 (B5DE51_XENTR) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL AAI68529.1
Gene names
Name:aco1 Xenbase XB-FEAT-1012107 Xenbase XB-GENE-1012108 Xenbase XB-FEAT-1012108
OrganismXenopus tropicalis (Western clawed frog) (Silurana tropicalis) EMBL AAI68529.1
Taxonomic identifier8364 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Amphibia › Batrachia › Anura › Mesobatrachia › Pipoidea › Pipidae › Xenopodinae › Xenopus › Silurana

Protein attributes

Sequence length893 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Biological processmetabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular function4 iron, 4 sulfur cluster binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5DE51 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: 7E09B4DCDC174CA5

FASTA89399,207
        10         20         30         40         50         60 
MSNPFQHLAE PLDPAQQDKK FYNLNKLGDS RYARLPFSIR VLLEAAIRNC DEFLVKKQDV 

        70         80         90        100        110        120 
ENILNWKLTQ HDNVEVPFRP ARVILQDFTG VPAVVDFAAM RDAVKRLGGD PQTINPVCPV 

       130        140        150        160        170        180 
DLVIDHSIQV DFNRRSDSLQ KNQELEFERN RERFEFLKWG SQAFQNMRII PPGSGIIHQV 

       190        200        210        220        230        240 
NLEYLARVVF DQDGYYYPDS LVGTDSHTTM IDGLGVLGWG VGGIEAEAVM LGQPISMVLP 

       250        260        270        280        290        300 
EVIGYKLMGN PHPLVTSTDI VLTVTKHLRQ VGVVGKFVEF FGTGVAQLSI ADRATIANMC 

       310        320        330        340        350        360 
PEYGATAAFF PVDLVSVQYL QQTGRAEEKV QYIQKYLEAA GLFRDFNNTN QDPDFSQVVE 

       370        380        390        400        410        420 
LDLSTVVPCC SGPKRPQDKV SVSEMKSDFQ NCLGAKQGFK GFQIPQGHHY DKVKFPYNNT 

       430        440        450        460        470        480 
EYELSHGSVV IAAITSCTNT SNPSVMLGAG LLAKKAVEAG LCVKPYIKTS LSPGSGVVTF 

       490        500        510        520        530        540 
YLRDSGVQPY LSKLGFDVVG YGCMTCIGNS GPLPDPVVEA ITQGDLVAVG VLSGNRNFEG 

       550        560        570        580        590        600 
RVHPNTRANY LASPPLVIAY AIAGTIRIDF EKDPLGVNAE GKEIYLRDIW PTRDEIQAVE 

       610        620        630        640        650        660 
RQYVIPGMFK EVYEKIEKVN ESWNDLKAPT DELYPWDPKS TYIKSPPFFD SLTMELQPPK 

       670        680        690        700        710        720 
SITDAYVLLN LGDSVTTDHI SPAGNIARNS PAARYLVNRG LTPREFNSYG SRRGNDAVMA 

       730        740        750        760        770        780 
RGTFANIRLF NKFINKQSPS TIYFPSNETL DIFDAAERYQ NDGHNLILLT GKEYGSGSSR 

       790        800        810        820        830        840 
DWAAKGPFLQ GIKAVLAESY ERIHRSNLVG MGIIPLQYLP GESAEALGLS GQERYTIVIP 

       850        860        870        880        890 
EEKDLRPGMN VEIKLDTGKS FEAIMRFDTD VELTYYRNGG ILNYMIRKMA NSS

« Hide

References

[1]NIH - Xenopus Gene Collection (XGC) project
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: N6 EMBL AAI68529.1.
Tissue: Intestine EMBL AAI68529.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC168529 mRNA. Translation: AAI68529.1.
RefSeqNP_001135643.1. NM_001142171.1.
UniGeneStr.48790.

3D structure databases

ProteinModelPortalB5DE51.
ModBaseSearch...

Protein-protein interaction databases

STRINGB5DE51.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100216202.
KEGGxtr:100216202.

Organism-specific databases

CTD48.
XenbaseXB-GENE-1012108. aco1.

Phylogenomic databases

eggNOGveNOG13744.
GeneTreeENSGT00530000063060.
HOVERGENHBG052147.
OMAIKYLVQT.
OrthoDBEOG4C2H8W.

Gene expression databases

BgeeB5DE51.

Family and domain databases

InterProIPR015931. Acnase/IPM_dHydase_lsu_aba_1/3.
IPR015937. Acoase/IPM_deHydtase.
IPR001030. Acoase/IPM_deHydtase_lsu_aba.
IPR015928. Aconitase/3IPM_dehydase_swvl.
IPR006249. Aconitase/Fe_reg_prot_2.
IPR015934. Aconitase/Fe_reg_prot_2/AcnD.
IPR015932. Aconitase/IPMdHydase_lsu_aba_2.
IPR018136. Aconitase_4Fe-4S_BS.
IPR000573. AconitaseA/IPMdHydase_ssu_swvl.
[Graphical view]
Gene3DG3DSA:3.30.499.10. Acnase/IPM_dHydase_lsu_aba_1/3. 3 hits.
G3DSA:3.20.19.10. Aconitase/3IPM_dehydase_swvl. 1 hit.
G3DSA:3.40.1060.10. Aconitase/IPMdHydase_lsu_aba_2. 1 hit.
KOK01681.
PANTHERPTHR11670. Aconitase-like_core. 1 hit.
PTHR11670:SF1. Aconitase/Fe_reg_prot_2/AcnD. 1 hit.
PfamPF00330. Aconitase. 1 hit.
PF00694. Aconitase_C. 1 hit.
[Graphical view]
PRINTSPR00415. ACONITASE.
SUPFAMSSF52016. Aconitase/3IPM_dehydase_swvl. 1 hit.
SSF53732. Aconitase_N. 1 hit.
TIGRFAMsTIGR01341. Aconitase_1. 1 hit.
PROSITEPS00450. ACONITASE_1. 1 hit.
PS01244. ACONITASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5DE51_XENTR
AccessionPrimary (citable) accession number: B5DE51
Entry history
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: November 16, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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