B5DDT2 (B5DDT2_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Dlx5a protein EMBL AAI65702.1

Gene names

Name:

dlx5a EMBL AAI65702.1 ZFIN ZDB-GENE-990415-49

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI65702.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	282 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location	Nucleus By similarity RuleBase RU000682.
Sequence similarities	Contains 1 homeobox DNA-binding domain. SAAS SAAS020479

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU000682 SAAS SAAS020479
Domain	Homeobox SAAS SAAS020479 RuleBase RU000682
Ligand	DNA-binding RuleBase RU000682 SAAS SAAS020479
Gene Ontology (GO)
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro transcription regulatory region sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5DDT2 [UniParc]. Last modified October 14, 2008. Version 1. Checksum: C1066B707A6AD9D9	FASTA	282	31,043
	10 20 30 40 50 60 MTGVFDRRIP SIKPADFQNP FQLSTMHHPS QESPTLPEST ATDSGYYSPA GGVHHGYCSP 70 80 90 100 110 120 NSGTYGKPLN AYQYQYHGVN GSSGNYSAKS YPDYGSYSTA YQQYAGTYNR VQSQPSPQEK 130 140 150 160 170 180 ETAEPEVRMV NGKPKKVRKP RTIYSSFQLA ALQRRFQNTQ YLALPERAEL AASLGLTQTQ 190 200 210 220 230 240 VKIWFQNKRS KLKKIMKNGE LPPEHSPSSS DPMACNSPQS PAVWDSQGPQ RPHHQPQNIN 250 260 270 280 TAASTFLESA SSSWYSSTGA MNSHLQAPGT LHSLALGSGT LY

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: PCR rescue EMBL AAI65702.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC165702 mRNA. Translation: AAI65702.1.
IPI	IPI00491132.
UniGene	Dr.429.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
ZFIN	ZDB-GENE-990415-49. dlx5a.
Phylogenomic databases
HOGENOM	HOG000231940.
HOVERGEN	HBG005493.
OrthoDB	EOG49PB05.
Family and domain databases
Gene3D	1.10.10.60. 1 hit.
InterPro	IPR022135. Distal-less_N. IPR017970. Homeobox_CS. IPR020479. Homeobox_metazoa. IPR001356. Homeodomain. IPR009057. Homeodomain-like. IPR000047. HTH_motif. [Graphical view]
Pfam	PF12413. DLL_N. 1 hit. PF00046. Homeobox. 1 hit. [Graphical view]
PRINTS	PR00024. HOMEOBOX. PR00031. HTHREPRESSR.
SMART	SM00389. HOX. 1 hit. [Graphical view]
SUPFAM	SSF46689. Homeodomain_like. 1 hit.
PROSITE	PS00027. HOMEOBOX_1. 1 hit. PS50071. HOMEOBOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5DDT2_DANRE

Accession

Primary (citable) accession number: B5DDT2

Entry history

Integrated into UniProtKB/TrEMBL:	October 14, 2008
Last sequence update:	October 14, 2008
Last modified:	April 3, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)