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B5BSV2 (B5BSV2_9ALTE) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alginate lyase EMBL BAG70358.1
Gene names
Name:AlgL EMBL BAG70358.1
OrganismAgarivorans sp. JAM-A1m EMBL BAG70358.1
Taxonomic identifier507618 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Agarivorans

Protein attributes

Sequence length309 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL BAG70358.1
Gene Ontology (GO)
   Molecular_functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5BSV2 [UniParc].

Last modified October 14, 2008. Version 1.
Checksum: B327292EB6DCB19C

FASTA30934,372
        10         20         30         40         50         60 
MKIKTLVVMM LGALSTSLSA ATTTPAEVLD LSCWKVTLPV SLDNGDRPTE FSEKEIAKGA 

        70         80         90        100        110        120 
MHEDYFYVNE AKDGVVFRSP IQGIKTSKNT KYVRSELREM MRCGDTSHKT KGVNGNNWVF 

       130        140        150        160        170        180 
SHNESAESLK NAAGVDGNLK ATLSVDHVTS TGEIWQQGRV IIGQIHAPDD EPVKIYYRKL 

       190        200        210        220        230        240 
PNHETGSVWI SHEPNGGDDI IFPMIGPTKP NYWKQKDKDI PKSYNDGIAL GEKFSYEIDI 

       250        260        270        280        290        300 
NGSDMTVTIS REGKADVVQK VDMQNSGYGL KDQWMYFKAG VYNQNRSGNP EDYVQATFYS 


LDVNHGSAK

« Hide

References

[1]"A new high-alkaline alginate lyase from a deep-sea bacterium Agarivorans sp."
Kobayashi T., Uchimura K., Miyazaki M., Nogi Y., Horikoshi K.
Extremophiles 13:121-129(2009)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JAM-A1m EMBL BAG70358.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB426616 Genomic DNA. Translation: BAG70358.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyPL7. Polysaccharide Lyase Family 7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.120.200. 1 hit.
InterProIPR014895. Alginate_lyase_2.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
[Graphical view]
PfamPF08787. Alginate_lyase2. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5BSV2_9ALTE
AccessionPrimary (citable) accession number: B5BSV2
Entry history
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: March 6, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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