Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Transporter associated with antigen processing 1

Gene

TAP1

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Transporter associated with antigen processing 1Imported
Gene namesi
Name:TAP1Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 42HelicalSequence analysisAdd BLAST22
Transmembranei62 – 83HelicalSequence analysisAdd BLAST22
Transmembranei135 – 153HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 300ABC transmembrane type-1InterPro annotationAdd BLAST279
Domaini333 – 569ABC transporterInterPro annotationAdd BLAST237

Sequence similaritiesi

Contains 1 ABC transporter domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOVERGENiHBG008358.
KOiK05653.
PhylomeDBiB5BSK4.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
IPR013306. Tap1/ABCB2.
[Graphical view]
PANTHERiPTHR24221:SF249. PTHR24221:SF249. 1 hit.
PfamiPF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B5BSK4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTMGAGRRL LLSLSPERRR CAAVMGLMAA SALGEMAVPY YMGRASDWVA
60 70 80 90 100
REDKLAAILP MVLLGLSSAV TELVCDVTFV GTLSRTQSRL QRRVFAAVLR
110 120 130 140 150
QSITELRADG AGDVAMRVTR DAEDVREALG KALSLLLWYL ARGLCLFATM
160 170 180 190 200
AWLSPRMALL TALALPLLLA LPRAVGHFRQ ALAPQMQKAQ ARASEVAVET
210 220 230 240 250
FQAMATVRSF ANEDGAAAHY RQRLQQSHRL EKKDVALYTA SLWTSGFSAL
260 270 280 290 300
ALKMGILYYG GQLVAAGTVS TGDLVTFLLY QIQFTDVLRV LLDYFPTLMK
310 320 330 340 350
AVGSSEKIFE FLDREPQVAP SGTMAPADLQ GHLQLEDVWF SYPGRQEPVL
360 370 380 390 400
KGVSLELRPG EVLALLGPPG AGKSTLVALV SRLHQPTAGR LLLDGHPLPA
410 420 430 440 450
YQHSYLCRQV AVVPQEPLLF ARSLHANISY GLGGCSRAQV TAAARRVGAH
460 470 480 490 500
DFITRLPQGY DTEVGELGGQ LSGGQRQAVA IARALLRDPR ILILDEHTSA
510 520 530 540 550
LDTESQQQVE QEILAAKGSG RAVLMVTGRA ALAARAQRVV VLEGGEVRQE
560 570 580
GPPHEVLRPG SLLRDWGQQG APGEGDRGSG GEG
Length:583
Mass (Da):62,780
Last modified:October 14, 2008 - v1
Checksum:i7805F6D3681AA96D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB426148 Genomic DNA. Translation: BAG69398.1.
RefSeqiNP_001129440.1. NM_001135968.1.
UniGeneiGga.14717.
Gga.50451.

Genome annotation databases

GeneIDi427727.
KEGGigga:427727.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB426148 Genomic DNA. Translation: BAG69398.1.
RefSeqiNP_001129440.1. NM_001135968.1.
UniGeneiGga.14717.
Gga.50451.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi427727.
KEGGigga:427727.

Organism-specific databases

CTDi6890.

Phylogenomic databases

HOVERGENiHBG008358.
KOiK05653.
PhylomeDBiB5BSK4.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
IPR013306. Tap1/ABCB2.
[Graphical view]
PANTHERiPTHR24221:SF249. PTHR24221:SF249. 1 hit.
PfamiPF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
PROSITEiPS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB5BSK4_CHICK
AccessioniPrimary (citable) accession number: B5BSK4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: June 8, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.