B5BD16 (B5BD16_SALPK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Negative regulator of allantoin and glyoxylate utilization operons EMBL CAR60259.1

Gene names

Ordered Locus Names:

SSPA2050

Organism

Salmonella paratyphi A (strain AKU_12601) [Complete proteome] [HAMAP] EMBL CAR60259.1

Taxonomic identifier

554290 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella

Protein attributes

Sequence length	272 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH iclR-type DNA-binding domain. RuleBase RU000705

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000705
Ligand	DNA-binding RuleBase RU000705
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B5BD16 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: EAFC0B2B1463DD75	FASTA	272	29,219
	10 20 30 40 50 60 MTEVRRRGRP GQAEPTAQKG AQALERGIAI LQYLERSGGS SSVSDISGSL DLPLSTTFRL 70 80 90 100 110 120 LKVLQAADFV YQDSQLGWWH IGLGVFNVGS AYIHNRDVLS VAGPFMHRLM LLSGETVNVA 130 140 150 160 170 180 IRNGNEAVLI GQKECKSMVR MCAPLGSRLP LHASGAGKAL LYPLTEEELV GIVVNTGLRR 190 200 210 220 230 240 FTPTTLVDLP ILLKNLEQAR EQGYTVDQEE HVVGLNCIAS AIYDDAGSVV AAISISGPAS 250 260 270 RLTEDRFISQ GELVRDTAKD ISTALGLKPP VA

References

[1]

"Complete genome of a clinical isolate of Salmonella enterica serovar Paratyphi A." Holt K.E., Thomson N.R., Wain J., Langridge G.C., Hassan R., Bhutta Z., Quail M., Norbertczak H., Danielle W., Simmonds M., White B., Bason N., Mungall K., Dougan G., Parkhill J. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM200053 Genomic DNA. Translation: CAR60259.1.
RefSeq	YP_002142887.1. NC_011147.1.
3D structure databases
ProteinModelPortal	B5BD16.
SMR	B5BD16. Positions 97-268.
ModBase	Search...
Protein-protein interaction databases
STRING	B5BD16.
Proteomic databases
PRIDE	B5BD16.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6811365.
GenomeReviews	Gene locus SSPA2050 in contig FM200053_GR.
KEGG	sek:SSPA2050.
PATRIC	32344271. VBISalEnt134303_2352.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG739407.
OMA	VFRILAT.
ProtClustDB	PRK10163.
Family and domain databases
InterPro	IPR014757. Tscrpt_reg_IclR_C. IPR005471. Tscrpt_reg_IclR_N. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
KO	K10973.
Pfam	PF09339. HTH_IclR. 1 hit. PF01614. IclR. 1 hit. [Graphical view]
SMART	SM00346. HTH_ICLR. 1 hit. [Graphical view]
PROSITE	PS51077. HTH_ICLR. 1 hit. PS51078. ICLR_ED. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B5BD16_SALPK

Accession

Primary (citable) accession number: B5BD16

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)