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B5BC75 (B5BC75_SALPK) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SSPA1870 EMBL CAR60067.1
OrganismSalmonella paratyphi A (strain AKU_12601) [Complete proteome] [HAMAP] EMBL CAR60067.1
Taxonomic identifier554290 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella

Protein attributes

Sequence length239 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B5BC75 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: C475560BDCD1F107

FASTA23926,877
        10         20         30         40         50         60 
MMKLEFSIYR YNPDVDNAPR MQDYTLEGEE GRDMMLLDAL IQLKEKDPSL SFRRSCREGV 

        70         80         90        100        110        120 
CGSDGLNMNG KNGLACITPI SALNQPGKKI VIRPLPGLPV IRDLVVDMGQ FYAQYEKIKP 

       130        140        150        160        170        180 
YLLNNGQNPP AREHLQMPEQ REKLDGLYEC ILCACCSTSC PSFWWNPDKF IGPAGLLAAY 

       190        200        210        220        230 
RFLIDSRDTE TDSRLEGMSD AFSVFRCHSI MNCVSVCPKG LNPTRAIGHI KSMLLQRSA 

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References

[1]"Pseudogene accumulation in the evolutionary histories of Salmonella enterica serovars Paratyphi A and Typhi."
Holt K.E., Thomson N.R., Wain J., Langridge G.C., Hasan R., Bhutta Z.A., Quail M.A., Norbertczak H., Walker D., Simmonds M., White B., Bason N., Mungall K., Dougan G., Parkhill J.
BMC Genomics 10:36-36(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AKU_12601.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM200053 Genomic DNA. Translation: CAR60067.1.
RefSeqYP_002142707.1. NC_011147.1.

3D structure databases

ProteinModelPortalB5BC75.
SMRB5BC75. Positions 2-239.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING554290.SSPA1870.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAR60067; CAR60067; SSPA1870.
PATRIC32343834. VBISalEnt134303_2142.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0479.
HOGENOMHOG000160590.
OMAEGVWRCR.
OrthoDBEOG6CK7MG.
ProtClustDBPRK05950.

Enzyme and pathway databases

BioCycSENT554290:GJDA-1998-MONOMER.

Family and domain databases

Gene3D3.10.20.30. 1 hit.
InterProIPR001041. 2Fe-2S_ferredoxin-type.
IPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR012675. Beta-grasp_dom.
IPR009051. Helical_ferredxn.
IPR004489. Succ_DH/fum_Rdtase_Fe-S.
IPR025192. Succ_DH/fum_Rdtase_N.
[Graphical view]
PfamPF13085. Fer2_3. 1 hit.
[Graphical view]
SUPFAMSSF46548. SSF46548. 1 hit.
SSF54292. SSF54292. 1 hit.
TIGRFAMsTIGR00384. dhsB. 1 hit.
PROSITEPS51085. 2FE2S_FER_2. 1 hit.
PS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB5BC75_SALPK
AccessionPrimary (citable) accession number: B5BC75
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: February 19, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)