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B5ARZ9 (B5ARZ9_THENE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha-amylase EMBL ACF75909.1
Gene names
Name:amyB EMBL ACF75909.1
OrganismThermotoga neapolitana EMBL ACF75909.1
Taxonomic identifier2337 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length422 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 4GKL
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B5ARZ9 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 1DB77300B53F67C3

FASTA42250,045
        10         20         30         40         50         60 
MNLKNLIIYE AFARAYPGEK GKKFLSLEKD LERLKGMGIN TVWLMPIHPT GVEGRKGTLG 

        70         80         90        100        110        120 
SPYAIRDYYE IDLLIGTKGD FKKFVKRAHE LNMYVLMDMV LNHAAVDNVL VKKHPEWFLR 

       130        140        150        160        170        180 
DENGNPTRKV PDWSDVVDFD YSNGELREYM INMMRYWVEE FDVDGFRCDV AGLVPLDFWL 

       190        200        210        220        230        240 
QARKNLDPVK RLIWISETHD PYMYQAFDIT YDYDGYYRFR DFIEGKNSLR EYIDFLRMQD 

       250        260        270        280        290        300 
HMYPRGYIKM RFLENHDQPR VAKFLSRESL MHWIAFLFTV KGVPLVHNGQ EYALKEDLDI 

       310        320        330        340        350        360 
FNEYTLPIPG EENEIFSLHR KLAHYRYKTN VFSNGEMIFI RNDQPERVIS YLWRHGNRFI 

       370        380        390        400        410        420 
LCVLNPLLEN TSVTLDFSGI WENICIHSKN VFNDDIVRVS VKNSRAKIKV GREPLILSFV 


LY

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References

[1]Park K.-M., Jun S.-Y., Choi K.-H., Park K.-H., Cha J.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Characterization of an exo-acting intracellular alpha-amylase from the hyperthermophilic bacterium Thermotoga neapolitana."
Park K.M., Jun S.Y., Choi K.H., Park K.H., Park C.S., Cha J.
Appl. Microbiol. Biotechnol. 86:555-566(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		EU871663 Genomic DNA. Translation: ACF75909.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4GKLX-ray2.40A/B1-422[»]
ProteinModelPortalB5ARZ9.
ModBaseSearch...

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB5ARZ9_THENE
AccessionPrimary (citable) accession number: B5ARZ9
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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