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Unreviewed, UniProtKB/TrEMBL B4YYG3 (B4YYG3_COFCA)

Last modified February 10, 2009. Version 3. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Putative galactomannan galactosyl transferase EMBL ACF33173.1
Gene names
Name: GMGT2 EMBL ACF33173.1
OrganismCoffea canephora (Robusta coffee) EMBL ACF33173.1
Taxonomic identifier49390 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsasteridslamiidsGentianalesRubiaceaeIxoroideaeCoffeeaeCoffea

Protein attributes

Sequence length447 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Molecular functionTransferase EMBL ACF33173.1
Gene Ontology (GO)
   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular functiontransferase activity, transferring hexosyl groups

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B4YYG3-1 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: E13C030AD5AF3DE8

FASTA44751,409
        10         20         30         40         50         60 
MSRAKAQTKQ SSYISRDSSR SYFLAVFVSM VLVFVICSLT ETLPSFQNRI STTGADTCNG 

        70         80         90        100        110        120 
EPPAVNRTHD PKEATFYDEP ELTYTLGKTI KDWDKKRKSW LNLHPSFAAG ADTRILIVTG 

       130        140        150        160        170        180 
SQPSPCKNPI GDHLLLRCFK NKADYSRIHG YDIFYNTACL DPKLCNVWAK VALIRAAMVA 

       190        200        210        220        230        240 
HPEAEWIWWM DSDAVFTDMY FKVPLQRYKQ HNLVVPGWPD MVYEKKSWVS LNTGSFFTRN 

       250        260        270        280        290        300 
CQWSLDFLDA WARMSPRSPD YKFWSETLMS TLSDKMFPGA DEQSSLVYLL LTEKKKWGDK 

       310        320        330        340        350        360 
IYLENQYDLS SYWVGVVGKL DKFTRTEADA EKNLPLLRRR RAEVVGESVG EVWEKYLENN 

       370        380        390        400        410        420 
TASEGKRPFI THFTGCQPCS GNHDPSYVGN TCWDAMERTL NYADNQVLRN LGFVHRDISR 

       430        440 
GSYVLPLAFD FPSEVLQRKK SGEEYNR 

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References

[1]"Characterization and expression analysis of genes directing galactomannan synthesis in coffee."
Pre M., Caillet V., Sobilo J., McCarthy J.
Ann. Bot. 102:207-220(2008) [PubMed: 18562467] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU716313 mRNA. Translation: ACF33173.1.

3D structure databases

ModBaseSearch...

Family and domain databases

InterProIPR008630. Glyco_trans_34.
[Graphical view]
PfamPF05637. Glyco_transf_34. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4YYG3_COFCA
AccessionPrimary (citable) accession number: B4YYG3
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: February 10, 2009
This is version 3 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information