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B4YK21

- B4YK21_9BURK

UniProt

B4YK21 - B4YK21_9BURK

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Protein
Submitted name: TumC
Gene
tumC
Organism
Advenella mimigardefordensis
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA-directed DNA polymerase activity Source: InterPro
  2. damaged DNA binding Source: InterPro

GO - Biological processi

  1. DNA repair Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

DNA damage, DNA repairUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
TumCImported
Gene namesi
Name:tumCImported
Encoded oniPlasmid pBTK445Imported
OrganismiAdvenella mimigardefordensisImported
Taxonomic identifieri302406 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceae

Family & Domainsi

Sequence similaritiesi

Contains umuC domain.SAAS annotations

Family and domain databases

InterProiIPR017961. DNA_pol_Y-fam_little_finger.
IPR001126. DNA_repair_prot_UmuC-like.
IPR017963. DNA_repair_prot_UmuC-like_N.
IPR025188. DUF4113.
IPR024728. PolY_HhH_motif.
[Graphical view]
PfamiPF13438. DUF4113. 1 hit.
PF00817. IMS. 1 hit.
PF11799. IMS_C. 1 hit.
PF11798. IMS_HHH. 1 hit.
[Graphical view]
PROSITEiPS50173. UMUC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4YK21-1 [UniParc]FASTAAdd to Basket

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MDDLGRCYAR YQGYAMTYGL IDGNCFYCSC ERVFRPFLKG KALISLSNND    50
GCVISRTDEA KAMGIKMGQP WFEIKHLEEK GLMALSSNFA LYGDMSDRMM 100
SVISRFSPRQ EIYSIDESFA DFSGITEDLS AYSQKIRAAV LRETGIPTCV 150
GIGATKTLAK LANHIAKKQP SWSGVCDLTQ LDRYQLADIM KNIEVGEVWG 200
IGRRIAKRLN ELGIYTVFDL ARMKPEAARA EFSIVVGKTV QELRGISRID 250
LEEVADPKKQ IISSRSFGLP MTDLAGLQSA LSEFVAIACN KLRGQNSVAA 300
SMQIFIRTSP FDKGKQYGNS RLVTPPYPTA DNLVFTKHAL KALDAIWRPG 350
FKYKKAGVML MDISPADAVQ GELFPVEPEH GKRAQLMVAL DGINARYGRG 400
SVKTGSIGFH DREHWYMRQE RKSQGYTTNW DEVLIARA 438
Length:438
Mass (Da):48,860
Last modified:September 23, 2008 - v1
Checksum:i355267C6F03D9F96
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EU585932 Genomic DNA. Translation: ACD43618.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EU585932 Genomic DNA. Translation: ACD43618.1 .

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR017961. DNA_pol_Y-fam_little_finger.
IPR001126. DNA_repair_prot_UmuC-like.
IPR017963. DNA_repair_prot_UmuC-like_N.
IPR025188. DUF4113.
IPR024728. PolY_HhH_motif.
[Graphical view ]
Pfami PF13438. DUF4113. 1 hit.
PF00817. IMS. 1 hit.
PF11799. IMS_C. 1 hit.
PF11798. IMS_HHH. 1 hit.
[Graphical view ]
PROSITEi PS50173. UMUC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Conjugative Type 4 secretion system of a novel large plasmid from the chemoautotroph Tetrathiobacter kashmirensis and construction of shuttle vectors for Alcaligenaceae."
    Dam B., Ghosh W., Das Gupta S.K.
    Appl. Environ. Microbiol. 75:4362-4373(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: WGTImported.
    Plasmid: pBTK445

Entry informationi

Entry nameiB4YK21_9BURK
AccessioniPrimary (citable) accession number: B4YK21
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 16, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

PlasmidImported

External Data

Dasty 3

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