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Unreviewed, UniProtKB/TrEMBL B4YIV8 (B4YIV8_COFAR)

Last modified February 10, 2009. Version 3. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Putative galactomannan galactosyl transferase EMBL ACE60602.1
Gene names
Name: GMGT1 EMBL ACE60602.1
OrganismCoffea arabica (Coffee) EMBL ACE60602.1
Taxonomic identifier13443 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsasteridslamiidsGentianalesRubiaceaeIxoroideaeCoffeeaeCoffea

Protein attributes

Sequence length448 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Molecular functionTransferase EMBL ACE60602.1
Gene Ontology (GO)
   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular functiontransferase activity, transferring hexosyl groups

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B4YIV8-1 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 5D3AE18FBD941714

FASTA44851,650
        10         20         30         40         50         60 
MPKHNSLLRT KTSSFFSSCF LYAAGTSASF LLAWAFWSFF SSPAPSANPS FSRGLASEAA 

        70         80         90        100        110        120 
LSCPAGKAGH NRSYDPPDPT FYDDPELSYT IEKTIKNWDE KRREWLEKHP SFAAGAADRI 

       130        140        150        160        170        180 
LMVTGSQATP CKNPIGDHLL LRFFKNKADY CRIHGYDIFY NTVLLQPKMF SFWAKMPAVK 

       190        200        210        220        230        240 
AVMLAHPEAE WIWWVDSDTA FTDMDFTLPL DRYKAHNLVV HGWPHLIHRE KSWTGLNAGV 

       250        260        270        280        290        300 
FLMRNCQWSM DFMEEWASMG PQAPEYDKWG VIQRTTFKDK TFPESDDQTG LAYLILKERE 

       310        320        330        340        350        360 
KWGNKIYMED EYYFEGYWME IVGTLENITD AYTGIEKRER RLRRRHAERV GESYGKVWEE 

       370        380        390        400        410        420 
HLKDAGYGRG SWRRPFMTHF TGCQPCSGDH NQMYSGQSCW DAMQIALNFA DNQVLRRYGF 

       430        440 
VHRDLLDTST VPPLPFDYPA SDLVGGAS 

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References

[1]"Characterization and expression analysis of genes directing galactomannan synthesis in coffee."
Pre M., Caillet V., Sobilo J., McCarthy J.
Ann. Bot. 102:207-220(2008) [PubMed: 18562467] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EU568117 mRNA. Translation: ACE60602.1.

3D structure databases

ModBaseSearch...

Family and domain databases

InterProIPR008630. Glyco_trans_34.
[Graphical view]
PfamPF05637. Glyco_transf_34. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4YIV8_COFAR
AccessionPrimary (citable) accession number: B4YIV8
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: February 10, 2009
This is version 3 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information