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B4UG87

- SYGB_ANASK

UniProt

B4UG87 - SYGB_ANASK

Protein

Glycine--tRNA ligase beta subunit

Gene

glyS

Organism
Anaeromyxobacter sp. (strain K)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: InterPro
    2. ATP binding Source: UniProtKB-KW
    3. glycine-tRNA ligase activity Source: UniProtKB-EC

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: InterPro
    2. glycyl-tRNA aminoacylation Source: InterPro

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciASP447217:GHB0-2586-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycine--tRNA ligase beta subunitUniRule annotation (EC:6.1.1.14UniRule annotation)
    Alternative name(s):
    Glycyl-tRNA synthetase beta subunitUniRule annotation
    Short name:
    GlyRSUniRule annotation
    Gene namesi
    Name:glySUniRule annotation
    Ordered Locus Names:AnaeK_2554
    OrganismiAnaeromyxobacter sp. (strain K)
    Taxonomic identifieri447217 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeAnaeromyxobacteraceaeAnaeromyxobacter
    ProteomesiUP000001871: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 701701Glycine--tRNA ligase beta subunitPRO_1000197168Add
    BLAST

    Proteomic databases

    PRIDEiB4UG87.

    Interactioni

    Subunit structurei

    Tetramer of two alpha and two beta subunits.UniRule annotation

    Protein-protein interaction databases

    STRINGi447217.AnaeK_2554.

    Structurei

    3D structure databases

    ProteinModelPortaliB4UG87.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0751.
    HOGENOMiHOG000264302.
    KOiK01879.
    OMAiFFAIDEK.
    OrthoDBiEOG661H9S.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    HAMAPiMF_00255. Gly_tRNA_synth_beta.
    InterProiIPR008909. DALR_anticod-bd.
    IPR015944. Gly-tRNA-synth_bsu.
    IPR006194. Gly-tRNA-synth_heterodimer.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PfamiPF05746. DALR_1. 1 hit.
    PF02092. tRNA_synt_2f. 1 hit.
    [Graphical view]
    PRINTSiPR01045. TRNASYNTHGB.
    SMARTiSM00836. DALR_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00211. glyS. 1 hit.
    PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4UG87-1 [UniParc]FASTAAdd to Basket

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    MADLLFEIGA EEIPAGFVPG ALRQLEDDLA KALADARLAH GEVRSVGTPR    50
    RLAVWARDVA PKQTDARTEA FGPPVAQAYD AEGKPTPAAT GFARSQGVEV 100
    SALVRAQTPK GERVAVTKVE KGRRAEQVLP ALLERLVGGL RFRKAMRSRF 150
    DEATFARPVR WMVALLGGRP LKVRHGEVTS GKVTYGHRFL APKAIALKGT 200
    PDDYLAKLRR AHVLADPVER RAALLAELAR AGKEAAGKVR EDPALVEQVL 250
    YLVEEPTAVV GEFEKSNLEL PPEVVISEMR NHQRYFAVVD GKGRLKNRFV 300
    AVSATRVKDP AVARHGYERV LRARLADARF FFEEDRKRKL HERIEDLGRR 350
    TFQAKLGSEL DRAQRIGAVA SALARALGKD ALVADLLEAS RLAKVDLNTG 400
    MVGEFPELQG TMGAHYARLE GLKPEIADAI EDHYKPIGAA EELPRSDLGA 450
    LVAVADRLHS LVGIIGVGEK ATGAADPFGL RRAAIGILRI VIARGYHLSL 500
    AAAVEQTLDA LSGVKLAAGR ALVAEQVLDF LRGRVRAAWT ERFDADLVEA 550
    VLAAGSDDVV DARRRLEALA DAKARPDFGS LAVAFKRVAN IQEKAGGSGA 600
    AAVDPALLRD AAEKDLLAAL EKVEQEVVAR RAARDYPAVL RTVATLEPAV 650
    ARFFDGVLVM AEDPALRANR LGLMRRVAAL FSDLADFRKI QAEAPAQARA 700
    G 701
    Length:701
    Mass (Da):75,745
    Last modified:September 23, 2008 - v1
    Checksum:i391A2CA4F2EA58BF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001131 Genomic DNA. Translation: ACG73779.1.
    RefSeqiWP_012526563.1. NC_011145.1.
    YP_002134908.1. NC_011145.1.

    Genome annotation databases

    EnsemblBacteriaiACG73779; ACG73779; AnaeK_2554.
    GeneIDi6785705.
    KEGGiank:AnaeK_2554.
    PATRICi20939777. VBIAnaSp90767_2578.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001131 Genomic DNA. Translation: ACG73779.1 .
    RefSeqi WP_012526563.1. NC_011145.1.
    YP_002134908.1. NC_011145.1.

    3D structure databases

    ProteinModelPortali B4UG87.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 447217.AnaeK_2554.

    Proteomic databases

    PRIDEi B4UG87.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACG73779 ; ACG73779 ; AnaeK_2554 .
    GeneIDi 6785705.
    KEGGi ank:AnaeK_2554.
    PATRICi 20939777. VBIAnaSp90767_2578.

    Phylogenomic databases

    eggNOGi COG0751.
    HOGENOMi HOG000264302.
    KOi K01879.
    OMAi FFAIDEK.
    OrthoDBi EOG661H9S.

    Enzyme and pathway databases

    BioCyci ASP447217:GHB0-2586-MONOMER.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    HAMAPi MF_00255. Gly_tRNA_synth_beta.
    InterProi IPR008909. DALR_anticod-bd.
    IPR015944. Gly-tRNA-synth_bsu.
    IPR006194. Gly-tRNA-synth_heterodimer.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    Pfami PF05746. DALR_1. 1 hit.
    PF02092. tRNA_synt_2f. 1 hit.
    [Graphical view ]
    PRINTSi PR01045. TRNASYNTHGB.
    SMARTi SM00836. DALR_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00211. glyS. 1 hit.
    PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K.

    Entry informationi

    Entry nameiSYGB_ANASK
    AccessioniPrimary (citable) accession number: B4UG87
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3