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B4UG87

- SYGB_ANASK

UniProt

B4UG87 - SYGB_ANASK

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Protein

Glycine--tRNA ligase beta subunit

Gene

glyS

Organism
Anaeromyxobacter sp. (strain K)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotation

GO - Molecular functioni

  1. arginine-tRNA ligase activity Source: InterPro
  2. ATP binding Source: UniProtKB-KW
  3. glycine-tRNA ligase activity Source: UniProtKB-EC

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: InterPro
  2. glycyl-tRNA aminoacylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciASP447217:GHB0-2586-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycine--tRNA ligase beta subunitUniRule annotation (EC:6.1.1.14UniRule annotation)
Alternative name(s):
Glycyl-tRNA synthetase beta subunitUniRule annotation
Short name:
GlyRSUniRule annotation
Gene namesi
Name:glySUniRule annotation
Ordered Locus Names:AnaeK_2554
OrganismiAnaeromyxobacter sp. (strain K)
Taxonomic identifieri447217 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeAnaeromyxobacteraceaeAnaeromyxobacter
ProteomesiUP000001871: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 701701Glycine--tRNA ligase beta subunitPRO_1000197168Add
BLAST

Proteomic databases

PRIDEiB4UG87.

Interactioni

Subunit structurei

Tetramer of two alpha and two beta subunits.UniRule annotation

Protein-protein interaction databases

STRINGi447217.AnaeK_2554.

Structurei

3D structure databases

ProteinModelPortaliB4UG87.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0751.
HOGENOMiHOG000264302.
KOiK01879.
OMAiFFAIDEK.
OrthoDBiEOG661H9S.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
HAMAPiMF_00255. Gly_tRNA_synth_beta.
InterProiIPR008909. DALR_anticod-bd.
IPR015944. Gly-tRNA-synth_bsu.
IPR006194. Gly-tRNA-synth_heterodimer.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PfamiPF05746. DALR_1. 1 hit.
PF02092. tRNA_synt_2f. 1 hit.
[Graphical view]
PRINTSiPR01045. TRNASYNTHGB.
SMARTiSM00836. DALR_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00211. glyS. 1 hit.
PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4UG87-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MADLLFEIGA EEIPAGFVPG ALRQLEDDLA KALADARLAH GEVRSVGTPR
60 70 80 90 100
RLAVWARDVA PKQTDARTEA FGPPVAQAYD AEGKPTPAAT GFARSQGVEV
110 120 130 140 150
SALVRAQTPK GERVAVTKVE KGRRAEQVLP ALLERLVGGL RFRKAMRSRF
160 170 180 190 200
DEATFARPVR WMVALLGGRP LKVRHGEVTS GKVTYGHRFL APKAIALKGT
210 220 230 240 250
PDDYLAKLRR AHVLADPVER RAALLAELAR AGKEAAGKVR EDPALVEQVL
260 270 280 290 300
YLVEEPTAVV GEFEKSNLEL PPEVVISEMR NHQRYFAVVD GKGRLKNRFV
310 320 330 340 350
AVSATRVKDP AVARHGYERV LRARLADARF FFEEDRKRKL HERIEDLGRR
360 370 380 390 400
TFQAKLGSEL DRAQRIGAVA SALARALGKD ALVADLLEAS RLAKVDLNTG
410 420 430 440 450
MVGEFPELQG TMGAHYARLE GLKPEIADAI EDHYKPIGAA EELPRSDLGA
460 470 480 490 500
LVAVADRLHS LVGIIGVGEK ATGAADPFGL RRAAIGILRI VIARGYHLSL
510 520 530 540 550
AAAVEQTLDA LSGVKLAAGR ALVAEQVLDF LRGRVRAAWT ERFDADLVEA
560 570 580 590 600
VLAAGSDDVV DARRRLEALA DAKARPDFGS LAVAFKRVAN IQEKAGGSGA
610 620 630 640 650
AAVDPALLRD AAEKDLLAAL EKVEQEVVAR RAARDYPAVL RTVATLEPAV
660 670 680 690 700
ARFFDGVLVM AEDPALRANR LGLMRRVAAL FSDLADFRKI QAEAPAQARA

G
Length:701
Mass (Da):75,745
Last modified:September 23, 2008 - v1
Checksum:i391A2CA4F2EA58BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001131 Genomic DNA. Translation: ACG73779.1.
RefSeqiWP_012526563.1. NC_011145.1.
YP_002134908.1. NC_011145.1.

Genome annotation databases

EnsemblBacteriaiACG73779; ACG73779; AnaeK_2554.
GeneIDi6785705.
KEGGiank:AnaeK_2554.
PATRICi20939777. VBIAnaSp90767_2578.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001131 Genomic DNA. Translation: ACG73779.1 .
RefSeqi WP_012526563.1. NC_011145.1.
YP_002134908.1. NC_011145.1.

3D structure databases

ProteinModelPortali B4UG87.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 447217.AnaeK_2554.

Proteomic databases

PRIDEi B4UG87.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACG73779 ; ACG73779 ; AnaeK_2554 .
GeneIDi 6785705.
KEGGi ank:AnaeK_2554.
PATRICi 20939777. VBIAnaSp90767_2578.

Phylogenomic databases

eggNOGi COG0751.
HOGENOMi HOG000264302.
KOi K01879.
OMAi FFAIDEK.
OrthoDBi EOG661H9S.

Enzyme and pathway databases

BioCyci ASP447217:GHB0-2586-MONOMER.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
HAMAPi MF_00255. Gly_tRNA_synth_beta.
InterProi IPR008909. DALR_anticod-bd.
IPR015944. Gly-tRNA-synth_bsu.
IPR006194. Gly-tRNA-synth_heterodimer.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
Pfami PF05746. DALR_1. 1 hit.
PF02092. tRNA_synt_2f. 1 hit.
[Graphical view ]
PRINTSi PR01045. TRNASYNTHGB.
SMARTi SM00836. DALR_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00211. glyS. 1 hit.
PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K.

Entry informationi

Entry nameiSYGB_ANASK
AccessioniPrimary (citable) accession number: B4UG87
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: September 23, 2008
Last modified: October 29, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3