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B4UEC1

- B4UEC1_ANASK

UniProt

B4UEC1 - B4UEC1_ANASK

Protein
Submitted name:

DNA ligase D

Gene

AnaeK_0832

Organism
Anaeromyxobacter sp. (strain K)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciASP447217:GHB0-838-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase DImported
    Gene namesi
    Ordered Locus Names:AnaeK_0832Imported
    OrganismiAnaeromyxobacter sp. (strain K)Imported
    Taxonomic identifieri447217 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeAnaeromyxobacteraceaeAnaeromyxobacter
    ProteomesiUP000001871: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi447217.AnaeK_0832.

    Structurei

    3D structure databases

    ProteinModelPortaliB4UEC1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiVAFTEWT.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4UEC1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPARPAGARR GRRLPRHAGG GELSRVARAP VPTYRAQLAT LVAAPPAGGG    50
    WVHETKYDGY RIGCALEGGR ATLWSRRGND WTAQFPEVAR AAEALPARSA 100
    LLDGEVAAVL PGGRTSFQAL QQAFSGGRRS LAYFVFDLLW LDGEDLSGRP 150
    LRERKDALRR LLGARGAVLR YAPHVEAPGA EVLREACRLG LEGIVSKRAD 200
    APYRPGRNTT WTKAKCLARQ ELVIGGFTDP EGSRQGIGAL LVGFHEGGAL 250
    RFAGKVGTGF TQASARALRA RLDRLERADP PFTPRPPGAL GRIAHWVRPE 300
    LVAEVAFTEW TDDGKVRHPS FQGLREDKRA ADVVREVPGA GAPPAPPAPP 350
    APAPAPTAAG RARRRAAAGA AGEVVIGGVR LSHPERTMFP GEGRAALTKA 400
    DVARYYDAVA GAMVPHLRGR PLTLFHCPEG ITGACRFMKH SKTWAPPAVR 450
    RIRIQEKTKV GEYLIADDRA ALLALVQMDV LELHTWNSTV EALEQPDRIV 500
    LDLDPGPEVP WREVVRAARL LRSALEALGL AAFVKTTGGA GLHVVTPLVP 550
    RRRWEDCLAF ARGLAATVAR HEPRAFTVAF ARAGRERRIL LDYLRNNRTN 600
    TSVAAFSLRA RPGAPASVPV AWDELGPRLR PERLDARTVP RRLARLGADP 650
    WAGWARAARP LGDAHLAAVG AAPVDEPARG GGRR 684
    Length:684
    Mass (Da):73,699
    Last modified:September 23, 2008 - v1
    Checksum:iEEB4B0465C23988E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001131 Genomic DNA. Translation: ACG72068.1.
    RefSeqiWP_012524895.1. NC_011145.1.
    YP_002133197.1. NC_011145.1.

    Genome annotation databases

    EnsemblBacteriaiACG72068; ACG72068; AnaeK_0832.
    GeneIDi6786289.
    KEGGiank:AnaeK_0832.
    PATRICi20936262. VBIAnaSp90767_0846.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001131 Genomic DNA. Translation: ACG72068.1 .
    RefSeqi WP_012524895.1. NC_011145.1.
    YP_002133197.1. NC_011145.1.

    3D structure databases

    ProteinModelPortali B4UEC1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 447217.AnaeK_0832.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACG72068 ; ACG72068 ; AnaeK_0832 .
    GeneIDi 6786289.
    KEGGi ank:AnaeK_0832.
    PATRICi 20936262. VBIAnaSp90767_0846.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi VAFTEWT.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci ASP447217:GHB0-838-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KImported.

    Entry informationi

    Entry nameiB4UEC1_ANASK
    AccessioniPrimary (citable) accession number: B4UEC1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3