Skip Header

Contribute Send feedback
Read comments (?) or add your own

B4UBP7 (B4UBP7_ANASK) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Alanine racemase HAMAP MF_01201 RuleBase RU000608
EC=5.1.1.1 HAMAP MF_01201 RuleBase RU000608
Gene names
Name:alr HAMAP MF_01201
Ordered Locus Names:AnaeK_3508
OrganismAnaeromyxobacter sp. (strain K) [Complete proteome] [HAMAP]
Taxonomic identifier447217 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Myxococcales › Cystobacterineae › Myxococcaceae › Anaeromyxobacter

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the D-alanine required for cell wall biosynthesis By similarity. HAMAP MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP MF_01201 SAAS SAAS009006

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site461Proton acceptor; specific for D-alanine By similarity HAMAP MF_01201
Active site2691Proton acceptor; specific for L-alanine By similarity HAMAP MF_01201

Amino acid modifications

Modified residue461N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01201

Sequences

Sequence LengthMass (Da)Tools
B4UBP7 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 79346438B2E23E70

FASTA39542,170
        10         20         30         40         50         60 
MRAMSIVPST WGGRPVWAEI DLDALAHNVR LLAARASPAR LYAVVKANAY GHGAVACGRA 

        70         80         90        100        110        120 
ALEAGAHGLA VVCVDEAEEL RRAGVEAPLL VIGNTPASDA ARVVALRLRP AVGAMDLVEA 

       130        140        150        160        170        180 
LSAEARRRGA EVPIHLELES GLNRHGLSPD ALVALAERAR ALPGLRVEGL FTHFAAAEEG 

       190        200        210        220        230        240 
DQRFTRAQFE VLRETSRRLP WVPERHCAAS ASILLDHEMA LEAVRGGLSL YGYRPAPWCG 

       250        260        270        280        290        300 
TDADLRPVMS LRARVARVSD VDRGATVGYG RTWAANRPTR VALVMCGYAD GYRRSFGNRT 

       310        320        330        340        350        360 
QVLVHGRRAP VVGRVAMDMC MVDVTAVPGV AAGDVVTLIG RDGDERVDAD DLATIADTIS 

       370        380        390 
WEILAGISAR VPRLYLRGGR AVEASTLVDR APVAI

« Hide

References

[1]"Complete sequence of Anaeromyxobacter sp. K."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikiva G., Beliaev A.
Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001131 Genomic DNA. Translation: ACG74721.1.
RefSeqYP_002135850.1. NC_011145.1.

3D structure databases

ProteinModelPortalB4UBP7.
ModBaseSearch...

Protein-protein interaction databases

STRINGB4UBP7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6783813.
GenomeReviewsGene locus AnaeK_3508 in contig CP001131_GR.
KEGGank:AnaeK_3508.
PATRIC20941758. VBIAnaSp90767_3551.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG712172.
OMAEGTPVWV.
ProtClustDBCLSK946673.

Family and domain databases

HAMAPMF_01201. Ala_racemase.
[Tree]
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KOK01775.
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. Alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4UBP7_ANASK
AccessionPrimary (citable) accession number: B4UBP7
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: January 25, 2012
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info