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B4U873

- B4U873_HYDS0

UniProt

B4U873 - B4U873_HYDS0

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Protein
Submitted name: DNA ligase D, 3'-phosphoesterase domain protein
Gene
HY04AAS1_0647
Organism
Hydrogenobaculum sp. (strain Y04AAS1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciHSP380749:GH30-669-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase D, 3'-phosphoesterase domain proteinImported
    Gene namesi
    Ordered Locus Names:HY04AAS1_0647Imported
    OrganismiHydrogenobaculum sp. (strain Y04AAS1)Imported
    Taxonomic identifieri380749 [NCBI]
    Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeHydrogenobaculum
    ProteomesiUP000001872: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi380749.HY04AAS1_0647.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000046158.
    KOiK01971.
    OMAiIETEDHP.
    OrthoDBiEOG661H49.

    Family and domain databases

    InterProiIPR014144. LigD_PE_domain.
    [Graphical view]
    PfamiPF13298. LigD_N. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B4U873-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDYSKKRDF SKTPEPRWSV IESHESIFVI QEHHASHLHW DFRLALDGVL    50
    KSWAIPKEPP IESGVKRLAI QTEDHPLEYA NFEGVIPEGQ YGAGVVKIWD 100
    KGTFELLERT DKKYDFILNG NKLKGKYHLI KFPKGGDNAW LFFKSD 146
    Length:146
    Mass (Da):16,914
    Last modified:September 23, 2008 - v1
    Checksum:iB440BB4221825743
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001130 Genomic DNA. Translation: ACG57334.1.
    RefSeqiWP_012513690.1. NC_011126.1.
    YP_002121312.1. NC_011126.1.

    Genome annotation databases

    EnsemblBacteriaiACG57334; ACG57334; HY04AAS1_0647.
    GeneIDi6743447.
    KEGGihya:HY04AAS1_0647.
    PATRICi22135950. VBIHydSp64203_0649.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001130 Genomic DNA. Translation: ACG57334.1 .
    RefSeqi WP_012513690.1. NC_011126.1.
    YP_002121312.1. NC_011126.1.

    3D structure databases

    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 380749.HY04AAS1_0647.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACG57334 ; ACG57334 ; HY04AAS1_0647 .
    GeneIDi 6743447.
    KEGGi hya:HY04AAS1_0647.
    PATRICi 22135950. VBIHydSp64203_0649.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000046158.
    KOi K01971.
    OMAi IETEDHP.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci HSP380749:GH30-669-MONOMER.

    Family and domain databases

    InterProi IPR014144. LigD_PE_domain.
    [Graphical view ]
    Pfami PF13298. LigD_N. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Y04AAS1.

    Entry informationi

    Entry nameiB4U873_HYDS0
    AccessioniPrimary (citable) accession number: B4U873
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: September 3, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3

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