B4U873 (B4U873_HYDS0) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase D, 3'-phosphoesterase domain protein EMBL ACG57334.1

Gene names

Ordered Locus Names:

HY04AAS1_0647

Organism

Hydrogenobaculum sp. (strain Y04AAS1) [Complete proteome] [HAMAP] EMBL ACG57334.1

Taxonomic identifier

380749 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Aquificae › Aquificae › Aquificales › Aquificaceae › Hydrogenobaculum

Protein attributes

Sequence length	146 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACG57334.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ligase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B4U873 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: B440BB4221825743	FASTA	146	16,914
	10 20 30 40 50 60 MSDYSKKRDF SKTPEPRWSV IESHESIFVI QEHHASHLHW DFRLALDGVL KSWAIPKEPP 70 80 90 100 110 120 IESGVKRLAI QTEDHPLEYA NFEGVIPEGQ YGAGVVKIWD KGTFELLERT DKKYDFILNG 130 140 NKLKGKYHLI KFPKGGDNAW LFFKSD

References

[1]

"Complete and draft genome sequences of six members of the Aquificales." Reysenbach A.L., Hamamura N., Podar M., Griffiths E., Ferreira S., Hochstein R., Heidelberg J., Johnson J., Mead D., Pohorille A., Sarmiento M., Schweighofer K., Seshadri R., Voytek M.A. J. Bacteriol. 191:1992-1993(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Y04AAS1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001130 Genomic DNA. Translation: ACG57334.1.
RefSeq	YP_002121312.1. NC_011126.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	380749.HY04AAS1_0647.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACG57334; ACG57334; HY04AAS1_0647.
GeneID	6743447.
KEGG	hya:HY04AAS1_0647.
PATRIC	22135950. VBIHydSp64203_0649.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000046158.
KO	K01971.
OMA	KGWLFFK.
ProtClustDB	CLSK900501.
Enzyme and pathway databases
BioCyc	HSP380749:GH30-669-MONOMER.
Family and domain databases
InterPro	IPR014144. LigD_PE_domain. [Graphical view]
Pfam	PF13298. LigD_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B4U873_HYDS0

Accession

Primary (citable) accession number: B4U873

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)