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Protein
Submitted name:

DNA ligase D, 3'-phosphoesterase domain protein

Gene

HY04AAS1_0647

Organism
Hydrogenobaculum sp. (strain Y04AAS1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciHSP380749:GH30-664-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase D, 3'-phosphoesterase domain proteinImported
Gene namesi
Ordered Locus Names:HY04AAS1_0647Imported
OrganismiHydrogenobaculum sp. (strain Y04AAS1)Imported
Taxonomic identifieri380749 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeHydrogenobaculum
Proteomesi
  • UP000001872 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi380749.HY04AAS1_0647.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini31 – 130LigD_NInterPro annotationAdd BLAST100

Phylogenomic databases

eggNOGiENOG4107YW7. Bacteria.
COG1793. LUCA.
HOGENOMiHOG000046158.
OMAiHFDFRLE.
OrthoDBiPOG091H0AZ9.

Family and domain databases

InterProiView protein in InterPro
IPR014144. LigD_PE_domain.
PfamiView protein in Pfam
PF13298. LigD_N. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

B4U873-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDYSKKRDF SKTPEPRWSV IESHESIFVI QEHHASHLHW DFRLALDGVL
60 70 80 90 100
KSWAIPKEPP IESGVKRLAI QTEDHPLEYA NFEGVIPEGQ YGAGVVKIWD
110 120 130 140
KGTFELLERT DKKYDFILNG NKLKGKYHLI KFPKGGDNAW LFFKSD
Length:146
Mass (Da):16,914
Last modified:September 23, 2008 - v1
Checksum:iB440BB4221825743
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001130 Genomic DNA. Translation: ACG57334.1.
RefSeqiWP_012513690.1. NC_011126.1.

Genome annotation databases

EnsemblBacteriaiACG57334; ACG57334; HY04AAS1_0647.
KEGGihya:HY04AAS1_0647.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiB4U873_HYDS0
AccessioniPrimary (citable) accession number: B4U873
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 7, 2017
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported