B4U7F0 (B4U7F0_HYDS0) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA topoisomerase (ATP-hydrolyzing) EMBL ACG57061.1
EC=5.99.1.3 EMBL ACG57061.1

Gene names

Ordered Locus Names:

HY04AAS1_0371

Organism

Hydrogenobaculum sp. (strain Y04AAS1) [Complete proteome] [HAMAP]

Taxonomic identifier

380749 [NCBI]

Taxonomic lineage

Bacteria › Aquificae › Aquificales › Aquificaceae › Hydrogenobaculum

Protein attributes

Sequence length	766 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	DNA-binding SAAS SAAS006691
Molecular function	Isomerase Topoisomerase SAAS SAAS006691
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA topological change Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	chromosome Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro DNA topoisomerase (ATP-hydrolyzing) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B4U7F0 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: 5AAB176C4430D9E3	FASTA	766	86,756
	10 20 30 40 50 60 MEILEIPIEE EARQSYLDYA MSVIVGRAIP DVRDGLKPVQ RRILYAMYEM DLTPDKPFKK 70 80 90 100 110 120 CARIVGDTMG RYHPHGDQAI YDALVRMAQD FNLRYPLVIG QGNFGSIDGD PPAAMRYTEA 130 140 150 160 170 180 KLSKITLSLL EDIENDTVDF VPNFDESVME PQVLPAKMPN LLCNGTTGIA VGLATSIPPH 190 200 210 220 230 240 NLKEVCDALV ALAQNQDITV EELMQYIKGP DFPTGGIIVG EVSPEVYKTG RGQVTVQAKA 250 260 270 280 290 300 RVEKTSSGRE QIIITEIPYM VNKAELIKKI AELARSGKLK EISDLRDESD KEGIRIVIEL 310 320 330 340 350 360 KRDAKGEAVL KKLYKNTSLR KNFPINMVAL VGLEPKLLNL KDILLEFFKH RLNVIYRRTE 370 380 390 400 410 420 FFLRKAEERL HIVEGLLICI KDIDKIIETI RASQDTQEAK EKLMSGWNLT EKQAQAILDL 430 440 450 460 470 480 RLQRLTSLET SKLQKEHDEL IENIKTYKNI LENKQERINI FIKETKELAD RFKDPRRTFI 490 500 510 520 530 540 EGMIKEDTYV DVFVTRNGFV KPIELLEEEK SPIVNVASLK FTEGLFIVSN KGRVYWTAGS 550 560 570 580 590 600 EALSGSSIHM KDTDEHVVGA FVREQYNSRL LILTNKGSIK KIPLVEFEYK TQGFQILKLS 610 620 630 640 650 660 EGEEVVYISG SQDESEILIL TKKGYINRIQ TQDVGATTSS SKAIQCIKLN ENDEAISVRA 670 680 690 700 710 720 LDDKIFGLLI TEEGYAKKIK LEDIPKKSRT SQGINVLKQK FLNACDLIFY NDDDNFDVLI 730 740 750 760 STFNGSHIKF DIKSLIQRIK VPAGIGVPEE KVIDLKDDKI YKVVSL

References

[1]

"Complete and draft genome sequences of six members of the Aquificales." Reysenbach A.-L., Hamamura N., Podar M., Griffiths E., Ferreira S., Hochstein R., Heidelberg J., Johnson J., Mead D., Pohorille A., Sarmiento M., Schweighofer K., Seshadri R., Voytek M.A. J. Bacteriol. 191:1992-1993(2009) [PubMed: 19136599] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001130 Genomic DNA. Translation: ACG57061.1.
RefSeq	YP_002121039.1. NC_011126.1.
3D structure databases
ProteinModelPortal	B4U7F0.
SMR	B4U7F0. Positions 25-480.
ModBase	Search...
Protein-protein interaction databases
STRING	B4U7F0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6743165.
GenomeReviews	Gene locus HY04AAS1_0371 in contig CP001130_GR.
KEGG	hya:HY04AAS1_0371.
PATRIC	22135382. VBIHydSp64203_0370.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG635183.
OMA	ERINIFI.
ProtClustDB	CLSK2299574.
Family and domain databases
InterPro	IPR006691. GyrA/parC_pinwhl. IPR002205. Topo_IIA_A/C. IPR013758. Topo_IIA_A/C_ab. IPR013757. Topo_IIA_A_a. IPR013760. Topo_IIA_cen. [Graphical view]
Gene3D	G3DSA:3.90.199.10. Topo_IIA_A/C_ab. 1 hit. G3DSA:1.10.268.10. Topo_IIA_A_a. 1 hit.
KO	K02469.
Pfam	PF03989. DNA_gyraseA_C. 3 hits. PF00521. DNA_topoisoIV. 1 hit. [Graphical view]
SMART	SM00434. TOP4c. 1 hit. [Graphical view]
SUPFAM	SSF56719. Topo_IIA_cen. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B4U7F0_HYDS0

Accession

Primary (citable) accession number: B4U7F0

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)