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B4U6D3 (B4U6D3_HYDS0) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase alpha subunit HAMAP MF_00254
EC=6.1.1.14 HAMAP MF_00254
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254
Gene names
Name:glyQ HAMAP MF_00254
Ordered Locus Names:HY04AAS1_1588
OrganismHydrogenobaculum sp. (strain Y04AAS1) [Complete proteome] [HAMAP]
Taxonomic identifier380749 [NCBI]
Taxonomic lineageBacteria › Aquificae › Aquificales › Aquificaceae › Hydrogenobaculum

Protein attributes

Sequence length282 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254 SAAS SAAS002310

Subunit structure

Tetramer of two alpha and two beta subunits By similarity. HAMAP MF_00254 SAAS SAAS002310

Subcellular location

Cytoplasm By similarity HAMAP MF_00254.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00254

Sequences

Sequence LengthMass (Da)Tools
B4U6D3 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 0B13BC3E8F5D99A9

FASTA28233,219
        10         20         30         40         50         60 
MYFQDIILNL QDFWSKNGCA IMQGYDIEVG AGTMNPATFL RVLGKKPFSG AYVEPSRRPK 

        70         80         90        100        110        120 
DGRYGENPNR LQHYFQFQVI LKPAKEDSQE LYLKSLETLG IDQNLHDIRF VEDDWESPTL 

       130        140        150        160        170        180 
GAWGLGWEVW LDGMEITQFT YFQQAGDIDL DLIACEITYG LERIAMYLQN VDNVFDLKWN 

       190        200        210        220        230        240 
KYLTYKDIYF EFEKEWSIYN FEKSNQDRLF KLFEIYEQEA KSLIEEKLVY PAYDYILKCS 

       250        260        270        280 
HTFNLLDARG AISVQERTNY IKRIKQMASL VASLYIEKEN SL

« Hide

References

[1]"Complete and draft genome sequences of six members of the Aquificales."
Reysenbach A.-L., Hamamura N., Podar M., Griffiths E., Ferreira S., Hochstein R., Heidelberg J., Johnson J., Mead D., Pohorille A., Sarmiento M., Schweighofer K., Seshadri R., Voytek M.A.
J. Bacteriol. 191:1992-1993(2009) [PubMed: 19136599] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001130 Genomic DNA. Translation: ACG58269.1.
RefSeqYP_002122247.1. NC_011126.1.

3D structure databases

ProteinModelPortalB4U6D3.
SMRB4U6D3. Positions 1-277.
ModBaseSearch...

Protein-protein interaction databases

STRINGB4U6D3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6744420.
GenomeReviewsGene locus HY04AAS1_1588 in contig CP001130_GR.
KEGGhya:HY04AAS1_1588.
PATRIC22137900. VBIHydSp64203_1593.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG285316.
OMACRRPTDG.
ProtClustDBPRK09348.

Family and domain databases

HAMAPMF_00254. Gly_tRNA_synth_alpha.
[Tree]
InterProIPR006194. Gly-tRNA-synth_II_heterodimer.
IPR002310. Gly-tRNA_synth_IIc_asu.
[Graphical view]
KOK01878.
PfamPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSPR01044. TRNASYNTHGA.
TIGRFAMsTIGR00388. GlyQ. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4U6D3_HYDS0
AccessionPrimary (citable) accession number: B4U6D3
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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