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B4U626 (GLGA_HYDS0) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:HY04AAS1_0004
OrganismHydrogenobaculum sp. (strain Y04AAS1) [Complete proteome] [HAMAP]
Taxonomic identifier380749 [NCBI]
Taxonomic lineageBacteriaAquificaeAquificalesAquificaceaeHydrogenobaculum

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 482482Glycogen synthase HAMAP-Rule MF_00484
PRO_1000126080

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B4U626 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 495C78730D21656E

FASTA48255,194
        10         20         30         40         50         60 
MKICFVASEC EPLVKVGGLG DVVQSLAKEL VNLGHQVSVI LPFYKSIKAQ NVQFITQHTL 

        70         80         90        100        110        120 
NLGGVYYDFH IYKTNLDNVD IFLIDQKTFF GREYVYGTPK GPYEDNYLRF AFFSLASLET 

       130        140        150        160        170        180 
LSHVCHIPDI IHIHDWHTAL VAVYKDLYFK HLDETATVLT IHNIAFQGIF LGHILPQIGI 

       190        200        210        220        230        240 
PWGLFNPEDL EFYNQVNFLK GGIVHSDVIT TVSKTHAKEI QTNMGFGLEG VLREKRYVFG 

       250        260        270        280        290        300 
ILNGIDTESW NPATDKSLYQ NYDINTFKAG KEKNKMYVKE LFGLETPHTR PLAAFIARLA 

       310        320        330        340        350        360 
KQKGLDLIEK AVDDAVKIGY DFIFLGSGDY YYQGKVLDMV KRNMGYVAAR IEYNDILSRK 

       370        380        390        400        410        420 
LYAGADMFLM PSEYEPCGIG QMIAMRYGAI PIVHKTGGLA DTVVDYNEDN EHGTGFSFED 

       430        440        450        460        470        480 
YTYKDFLYTM ARAMIVYQKK YIPEDNEWYN IVSNAMAQDF SWRRSVQEYI KIYKTAKLIK 


MH 

« Hide

References

[1]"Complete and draft genome sequences of six members of the Aquificales."
Reysenbach A.-L., Hamamura N., Podar M., Griffiths E., Ferreira S., Hochstein R., Heidelberg J., Johnson J., Mead D., Pohorille A., Sarmiento M., Schweighofer K., Seshadri R., Voytek M.A.
J. Bacteriol. 191:1992-1993(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Y04AAS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001130 Genomic DNA. Translation: ACG56696.1.
RefSeqYP_002120674.1. NC_011126.1.

3D structure databases

ProteinModelPortalB4U626.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING380749.HY04AAS1_0004.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACG56696; ACG56696; HY04AAS1_0004.
GeneID6742782.
KEGGhya:HY04AAS1_0004.
PATRIC22134620. VBIHydSp64203_0004.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAMWQLASR.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycHSP380749:GH30-4-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_HYDS0
AccessionPrimary (citable) accession number: B4U626
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 23, 2008
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways