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Protein

Glycogen synthase

Gene

glgA

Organism
Hydrogenobaculum sp. (strain Y04AAS1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciHSP380749:GH30-4-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:HY04AAS1_0004
OrganismiHydrogenobaculum sp. (strain Y04AAS1)
Taxonomic identifieri380749 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeHydrogenobaculum
ProteomesiUP000001872: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 482482Glycogen synthasePRO_1000126080Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi380749.HY04AAS1_0004.

Structurei

3D structure databases

ProteinModelPortaliB4U626.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPAYDEAM.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

B4U626-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKICFVASEC EPLVKVGGLG DVVQSLAKEL VNLGHQVSVI LPFYKSIKAQ
60 70 80 90 100
NVQFITQHTL NLGGVYYDFH IYKTNLDNVD IFLIDQKTFF GREYVYGTPK
110 120 130 140 150
GPYEDNYLRF AFFSLASLET LSHVCHIPDI IHIHDWHTAL VAVYKDLYFK
160 170 180 190 200
HLDETATVLT IHNIAFQGIF LGHILPQIGI PWGLFNPEDL EFYNQVNFLK
210 220 230 240 250
GGIVHSDVIT TVSKTHAKEI QTNMGFGLEG VLREKRYVFG ILNGIDTESW
260 270 280 290 300
NPATDKSLYQ NYDINTFKAG KEKNKMYVKE LFGLETPHTR PLAAFIARLA
310 320 330 340 350
KQKGLDLIEK AVDDAVKIGY DFIFLGSGDY YYQGKVLDMV KRNMGYVAAR
360 370 380 390 400
IEYNDILSRK LYAGADMFLM PSEYEPCGIG QMIAMRYGAI PIVHKTGGLA
410 420 430 440 450
DTVVDYNEDN EHGTGFSFED YTYKDFLYTM ARAMIVYQKK YIPEDNEWYN
460 470 480
IVSNAMAQDF SWRRSVQEYI KIYKTAKLIK MH
Length:482
Mass (Da):55,194
Last modified:September 23, 2008 - v1
Checksum:i495C78730D21656E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001130 Genomic DNA. Translation: ACG56696.1.
RefSeqiWP_012513053.1. NC_011126.1.
YP_002120674.1. NC_011126.1.

Genome annotation databases

EnsemblBacteriaiACG56696; ACG56696; HY04AAS1_0004.
GeneIDi6742782.
KEGGihya:HY04AAS1_0004.
PATRICi22134620. VBIHydSp64203_0004.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001130 Genomic DNA. Translation: ACG56696.1.
RefSeqiWP_012513053.1. NC_011126.1.
YP_002120674.1. NC_011126.1.

3D structure databases

ProteinModelPortaliB4U626.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi380749.HY04AAS1_0004.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACG56696; ACG56696; HY04AAS1_0004.
GeneIDi6742782.
KEGGihya:HY04AAS1_0004.
PATRICi22134620. VBIHydSp64203_0004.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPAYDEAM.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciHSP380749:GH30-4-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y04AAS1.

Entry informationi

Entry nameiGLGA_HYDS0
AccessioniPrimary (citable) accession number: B4U626
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 23, 2008
Last modified: January 7, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.