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B4TQM0 (B4TQM0_SALSV) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length534 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. RuleBase RU000555

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. RuleBase RU000555

Sequence similarities

Belongs to the malate synthase family. RuleBase RU000555

Ontologies

Keywords
   Biological processGlyoxylate bypass RuleBase RU000555
Tricarboxylic acid cycle RuleBase RU000555
   Molecular functionAcyltransferase EMBL ACF91332.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglyoxylate cycle

Inferred from electronic annotation. Source: UniProtKB-UniPathway

tricarboxylic acid cycle

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionmalate synthase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1671Proton acceptor By similarity PIRSR PIRSR001363-1
Active site4481Proton donor By similarity PIRSR PIRSR001363-1

Sequences

Sequence LengthMass (Da)Tools
B4TQM0 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 87554C676E305DA6

FASTA53460,558
        10         20         30         40         50         60 
MMNPQATTTD ELTFTRPQGE LEKQVLTAEA VEFLTELVTR FTPKRNKLLA ARIQQQQDID 

        70         80         90        100        110        120 
NGKLPDFISE TTSIRESNWQ IRGIPADLQD RRVEITGPVE RKMVINALNA NVKVFMADFE 

       130        140        150        160        170        180 
DSLAPDWNKV MDGQINLRDA VNGTISYTNE AGKIYQLKPD PAVLICRVRG LHLPEKHVTW 

       190        200        210        220        230        240 
RGEAIPGSLF DFALYFFHNY KALLAKGSGP YFYLPKTQAW QEAAWWSEVF SYAEDRFNLP 

       250        260        270        280        290        300 
RGTIKATLLI ETLPAVFQMD EILHALRDHI VGLNCGRWDY IFSYIKTLKN YPDRVLPDRQ 

       310        320        330        340        350        360 
VVTMDKPFLS AYSRLLIKTC HKRGAFAMGG MAAFIPSKDV ERNNQVLAKV KADKALEANN 

       370        380        390        400        410        420 
GHDGTWIAHP GLADTAMAVF NEVLGEHKNQ LFITRDEDAP ITAEQLLEPC EGERTEAGMR 

       430        440        450        460        470        480 
ANIRVAVQYI EAWISGNGCV PIYGLMEDAA TAEISRTSIW QWIHHEKTLS NGKPVTKTLF 

       490        500        510        520        530 
REMLAEEMRV IQDELGEHRY SSGRFDDAAR LMEQITTSDD LIDFLTLPGY RLLA

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References

[1]"Complete genome of Salmonella schwarzengrund strain CVM19633."
Ravel J., Fricke W.F., White D., McDermott P., Mammel M., Rosovitz M., Leclerc J., Cebula T., Sebastian Y.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CVM19633.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001127 Genomic DNA. Translation: ACF91332.1.
RefSeqYP_002117081.1. NC_011094.1.

3D structure databases

ProteinModelPortalB4TQM0.
ModBaseSearch...

Protein-protein interaction databases

STRING439843.SeSA_A4394.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACF91332; ACF91332; SeSA_A4394.
GeneID6518587.
KEGGsew:SeSA_A4394.
PATRIC32377347. VBISalEnt87589_4353.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2225.
HOGENOMHOG000238464.
KOK01638.
OMAGFDGTWV.
ProtClustDBPRK09255.

Enzyme and pathway databases

BioCycSENT439843:GHHR-2793-MONOMER.
UniPathwayUPA00703; UER00720.

Family and domain databases

InterProIPR011076. Malate_synth-like.
IPR006252. Malate_synthA.
IPR001465. Malate_synthase.
IPR019830. Malate_synthase_CS.
[Graphical view]
PANTHERPTHR21631:SF1. PTHR21631:SF1. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
PIRSFPIRSF001363. Malate_synth. 1 hit.
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01344. malate_syn_A. 1 hit.
PROSITEPS00510. MALATE_SYNTHASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4TQM0_SALSV
AccessionPrimary (citable) accession number: B4TQM0
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: May 1, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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