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B4THX1

- B4THX1_SALHS

UniProt

B4THX1 - B4THX1_SALHS

Protein
Submitted name:

Uptake hydrogenase small subunit

Gene

SeHA_C1710

Organism
Salmonella heidelberg (strain SL476)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 3Fe-4S cluster.UniRule annotation
    Binds 2 4Fe-4S clusters.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi62 – 621Iron-sulfur 1 (4Fe-4S)UniRule annotation
    Metal bindingi65 – 651Iron-sulfur 1 (4Fe-4S)UniRule annotation
    Metal bindingi160 – 1601Iron-sulfur 1 (4Fe-4S)UniRule annotation
    Metal bindingi194 – 1941Iron-sulfur 1 (4Fe-4S)UniRule annotation
    Metal bindingi232 – 2321Iron-sulfur 2 (4Fe-4S); via pros nitrogenUniRule annotation
    Metal bindingi235 – 2351Iron-sulfur 2 (4Fe-4S)UniRule annotation
    Metal bindingi260 – 2601Iron-sulfur 2 (4Fe-4S)UniRule annotation
    Metal bindingi266 – 2661Iron-sulfur 2 (4Fe-4S)UniRule annotation
    Metal bindingi275 – 2751Iron-sulfur 3 (3Fe-4S)UniRule annotation
    Metal bindingi294 – 2941Iron-sulfur 3 (3Fe-4S)UniRule annotation
    Metal bindingi297 – 2971Iron-sulfur 3 (3Fe-4S)UniRule annotation

    GO - Molecular functioni

    1. 3 iron, 4 sulfur cluster binding Source: UniProtKB-KW
    2. 4 iron, 4 sulfur cluster binding Source: UniProtKB-KW
    3. ferredoxin hydrogenase activity Source: InterPro
    4. hydrogenase (acceptor) activity Source: UniProtKB-EC
    5. metal ion binding Source: UniProtKB-KW

    Keywords - Molecular functioni

    OxidoreductaseImported

    Keywords - Ligandi

    3Fe-4SUniRule annotation, 4Fe-4SUniRule annotation, Iron, Iron-sulfur, Metal-binding

    Enzyme and pathway databases

    BioCyciSENT454169:GHYG-1698-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uptake hydrogenase small subunitImported (EC:1.12.99.6Imported)
    Gene namesi
    Ordered Locus Names:SeHA_C1710Imported
    OrganismiSalmonella heidelberg (strain SL476)Imported
    Taxonomic identifieri454169 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
    ProteomesiUP000001866: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ferredoxin hydrogenase complex Source: InterPro

    PTM / Processingi

    Proteomic databases

    PRIDEiB4THX1.

    Interactioni

    Protein-protein interaction databases

    STRINGi454169.SeHA_C1710.

    Structurei

    3D structure databases

    ProteinModelPortaliB4THX1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1740.
    HOGENOMiHOG000278822.
    OMAiVILHYVL.
    OrthoDBiEOG6J74S9.

    Family and domain databases

    Gene3Di3.40.50.700. 1 hit.
    4.10.480.10. 1 hit.
    InterProiIPR027394. Cytochrome-c3_hydrogenase_C.
    IPR006137. NADH_UbQ_OxRdtase-like_20kDa.
    IPR001821. NiFe_hydrogenase_ssu.
    IPR006311. TAT_signal.
    IPR019546. TAT_signal_bac_arc.
    [Graphical view]
    PfamiPF14720. NiFe_hyd_SSU_C. 1 hit.
    PF01058. Oxidored_q6. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000310. NiFe_hyd_ssu. 1 hit.
    PRINTSiPR00614. NIHGNASESMLL.
    TIGRFAMsiTIGR00391. hydA. 1 hit.
    TIGR01409. TAT_signal_seq. 1 hit.
    PROSITEiPS51318. TAT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4THX1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQTQDTFYQV MRRHGVTRRS FLKFCSLTAT SLGLSSSMIP QIAYALENKP    50
    RTPVIWLHGL ECTCCTESFI RSAHPLAKDA ILSLISLDYD DTIMAAAGQQ 100
    AEQALADVMR EYKGNYIVAV EGNAPLNEDG MFCILAGEPF LEKLKRVSAD 150
    AKAIIAWGSC ASWGCVQAAR PNPTKATPVH KLITDKPIIK VPGCPPIPEV 200
    MSAVITYMLA FDRIPPLDRL GRPKMFYGQR IHDKCYRRAH FDAGQFVEAW 250
    DDEGARKGYC LYKMGCKGPT TYNACSTVRW NDGVSFPIQS GHGCLGCSED 300
    GFWDYGSFYS RATGIPQTGI EATADKIGLG VAGVAGAAAI AHATVSAIKH 350
    ARNKNNTSSE NAPEEKK 367
    Length:367
    Mass (Da):40,030
    Last modified:September 23, 2008 - v1
    Checksum:i3196635942431D56
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001120 Genomic DNA. Translation: ACF70397.1.
    RefSeqiYP_002045577.1. NC_011083.1.

    Genome annotation databases

    EnsemblBacteriaiACF70397; ACF70397; SeHA_C1710.
    PATRICi18511122. VBISalEnt43179_1668.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001120 Genomic DNA. Translation: ACF70397.1 .
    RefSeqi YP_002045577.1. NC_011083.1.

    3D structure databases

    ProteinModelPortali B4THX1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 454169.SeHA_C1710.

    Proteomic databases

    PRIDEi B4THX1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACF70397 ; ACF70397 ; SeHA_C1710 .
    PATRICi 18511122. VBISalEnt43179_1668.

    Phylogenomic databases

    eggNOGi COG1740.
    HOGENOMi HOG000278822.
    OMAi VILHYVL.
    OrthoDBi EOG6J74S9.

    Enzyme and pathway databases

    BioCyci SENT454169:GHYG-1698-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.700. 1 hit.
    4.10.480.10. 1 hit.
    InterProi IPR027394. Cytochrome-c3_hydrogenase_C.
    IPR006137. NADH_UbQ_OxRdtase-like_20kDa.
    IPR001821. NiFe_hydrogenase_ssu.
    IPR006311. TAT_signal.
    IPR019546. TAT_signal_bac_arc.
    [Graphical view ]
    Pfami PF14720. NiFe_hyd_SSU_C. 1 hit.
    PF01058. Oxidored_q6. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000310. NiFe_hyd_ssu. 1 hit.
    PRINTSi PR00614. NIHGNASESMLL.
    TIGRFAMsi TIGR00391. hydA. 1 hit.
    TIGR01409. TAT_signal_seq. 1 hit.
    PROSITEi PS51318. TAT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution."
      Fricke W.F., Mammel M.K., McDermott P.F., Tartera C., White D.G., Leclerc J.E., Ravel J., Cebula T.A.
      J. Bacteriol. 193:3556-3568(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SL476Imported.

    Entry informationi

    Entry nameiB4THX1_SALHS
    AccessioniPrimary (citable) accession number: B4THX1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3