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B4STE2

- SYR_STRM5

UniProt

B4STE2 - SYR_STRM5

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Protein
Arginine--tRNA ligase
Gene
argS, Smal_0280
Organism
Stenotrophomonas maltophilia (strain R551-3)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-HAMAP
  2. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciSMAL391008:GH1H-281-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligase (EC:6.1.1.19)
Alternative name(s):
Arginyl-tRNA synthetase
Short name:
ArgRS
Gene namesi
Name:argS
Ordered Locus Names:Smal_0280
OrganismiStenotrophomonas maltophilia (strain R551-3)
Taxonomic identifieri391008 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeStenotrophomonasStenotrophomonas maltophilia group
ProteomesiUP000001867: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 562562Arginine--tRNA ligaseUniRule annotation
PRO_1000095409Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi391008.Smal_0280.

Structurei

3D structure databases

ProteinModelPortaliB4STE2.

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi129 – 13911"HIGH" regionUniRule annotation
Add
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0018.
HOGENOMiHOG000247214.
KOiK01887.
OMAiNFERNSA.
OrthoDBiEOG6JB13C.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4STE2-1 [UniParc]FASTAAdd to Basket

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MKNLLRALIS QGIEALRANG TLPADSLPPD FVVERPKTRD HGDFATNAAM    50
LLAKAARSNP RALAQALVEA LPRSEDVSKV EIAGPGFINF YLAPAAYQRE 100
AASVIKEGHD YGRNLSGNGR TVGVEYVSAN PTGPLHVGHG RAAAIGDCVA 150
RVLDANGWNA KREFYYNDAG VQIENLSLSV QARVKGIAPD QDGWPEGGYR 200
GEYIADVARA YMAGASVDLE GTLVVGAKDA KDMQAIRRFA VAYLRNEQNL 250
DLAAFGVDFD IYFLESSLYA DGKVAEAVAK LQASGHTYEE GGALWLRSTD 300
FGDDKDRVMR KSDGTFTYFV PDVAYHLSKW QRGYERAITE LGADHHGSLA 350
RVRAGLQAME VGIPQGWPEY VLHQMVTVMR GGEEVKLSKR AGSYFTLRDL 400
IEEAGRDATR WFLIARKPDS QLTFDIDLAR QQSNDNPVFY VQYAHARVCS 450
LLRQAQEKGL VYEQGNGLAN LGRLSDDASL LLMNEISRYP EVVEAAGVAL 500
EPHLVAQYLR ELAHAFHTWY HGTPVLVDDS ADRNAKLTLA CAARQVLANG 550
LELLGVSAPE KM 562
Length:562
Mass (Da):61,499
Last modified:September 23, 2008 - v1
Checksum:i327AB7E3031584FB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001111 Genomic DNA. Translation: ACF49985.1.
RefSeqiWP_012509811.1. NC_011071.1.
YP_002026668.1. NC_011071.1.

Genome annotation databases

EnsemblBacteriaiACF49985; ACF49985; Smal_0280.
GeneIDi6478065.
KEGGismt:Smal_0280.
PATRICi23705362. VBISteMal40512_0284.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001111 Genomic DNA. Translation: ACF49985.1 .
RefSeqi WP_012509811.1. NC_011071.1.
YP_002026668.1. NC_011071.1.

3D structure databases

ProteinModelPortali B4STE2.
ModBasei Search...

Protein-protein interaction databases

STRINGi 391008.Smal_0280.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACF49985 ; ACF49985 ; Smal_0280 .
GeneIDi 6478065.
KEGGi smt:Smal_0280.
PATRICi 23705362. VBISteMal40512_0284.

Phylogenomic databases

eggNOGi COG0018.
HOGENOMi HOG000247214.
KOi K01887.
OMAi NFERNSA.
OrthoDBi EOG6JB13C.

Enzyme and pathway databases

BioCyci SMAL391008:GH1H-281-MONOMER.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPi MF_00123. Arg_tRNA_synth.
InterProi IPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
PANTHERi PTHR11956. PTHR11956. 1 hit.
Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view ]
PRINTSi PR01038. TRNASYNTHARG.
SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view ]
SUPFAMi SSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsi TIGR00456. argS. 1 hit.
PROSITEi PS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: R551-3.

Entry informationi

Entry nameiSYR_STRM5
AccessioniPrimary (citable) accession number: B4STE2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: September 23, 2008
Last modified: September 3, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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