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B4SRN2 (B4SRN2_STRM5) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length206 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124 RuleBase RU004165

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding88 – 914ATP By similarity HAMAP-Rule MF_00124

Sites

Active site891Proton acceptor By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
B4SRN2 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: A157C28B9E18D518

FASTA20623,078
        10         20         30         40         50         60 
MAKLYFYYSA MNAGKTTTLL QSAHNYRERG MRVAILTPRL DDRAGAGVVA SRIGLRADGM 

        70         80         90        100        110        120 
AFDRDTDLQR WVEHDLATNG PMGCVLVDEA QFLTRAQVWQ LSEIVDQLRI PVLCYGLRTD 

       130        140        150        160        170        180 
FRGELFEGSQ YLLAWADEMQ EIKTICHSGK KATMTVRVDE HGRAVQDGPQ VEIGGNDRYV 

       190        200 
SVSRAEFKKI TRGEGRIDPA QAPLPL 

« Hide

References

[1]"Complete sequence of Stenotrophomonas maltophilia R551-3."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Taghavi S., Monchy S., Newman L., Vangronsveld J., van der Lelie D., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: R551-3 EMBL ACF49752.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001111 Genomic DNA. Translation: ACF49752.1.
RefSeqYP_002026435.1. NC_011071.1.

3D structure databases

ProteinModelPortalB4SRN2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING391008.Smal_0047.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACF49752; ACF49752; Smal_0047.
GeneID6477596.
KEGGsmt:Smal_0047.
PATRIC23704886. VBISteMal40512_0047.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1435.
HOGENOMHOG000076391.
KOK00857.
OMARTICHCG.
OrthoDBEOG69D3J2.
ProtClustDBPRK04296.

Enzyme and pathway databases

BioCycSMAL391008:GH1H-47-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB4SRN2_STRM5
AccessionPrimary (citable) accession number: B4SRN2
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 16, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)