B4SQH8 (B4SQH8_STRM5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase family 18 EMBL ACF52509.1

Gene names

Ordered Locus Names:

Smal_2809

Organism

Stenotrophomonas maltophilia (strain R551-3) [Complete proteome] [HAMAP] EMBL ACF52509.1

Taxonomic identifier

391008 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Stenotrophomonas › Stenotrophomonas maltophilia group

Protein attributes

Sequence length	396 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACF52509.1
Molecular function	Hydrolase EMBL ACF52509.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL ACF52509.1
	Chain	25 – 396	372	Potential EMBL ACF52509.1		PRO_5000389518

Sequences

	Sequence		Length	Mass (Da)
	B4SQH8 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: E9E796269F798B20	FASTA	396	43,136
	10 20 30 40 50 60 MFRQTVAVLA VLIAGALPIA AHAAPAQPPI FGAYYPGGSA ERYPVSSIPA ERLTHLFYAF 70 80 90 100 110 120 STIEDGRCTI GAEAPKNFAA LAELKKAHPH LRTLISIGGW GAGGFSDAAL NEASRKRLVD 130 140 150 160 170 180 SCMALFFERH AGSFDGVDID WEFPVSGGPK ELAHRPQDRA NLTRLAQAFR VALDARGRKA 190 200 210 220 230 240 GQPMLLTAAL AAGRLQTDGP YDPAASYDLP ALARLFDFIN LMSYDMGTGF SAVSTFNAPL 250 260 270 280 290 300 HEVPADPLAP ELRRWNNVAG AVQYYREHGV PADKLVLGVP FYGRGFKVTG EAADGLYQAY 310 320 330 340 350 360 SAPADAGDWR VIKARYLDQP GWTKHWQPQA QSPWLYNAEQ KVFISYEDPR SIGLRAQFAR 370 380 390 EQGLAGVFMW ELTGDDEQAS LLNAMLGPWQ KARIGD

References

[1]

"Complete sequence of Stenotrophomonas maltophilia R551-3." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Taghavi S., Monchy S., Newman L., Vangronsveld J., van der Lelie D., Richardson P. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: R551-3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001111 Genomic DNA. Translation: ACF52509.1.
RefSeq	YP_002029192.1. NC_011071.1.
3D structure databases
ProteinModelPortal	B4SQH8.
ModBase	Search...
Protein-protein interaction databases
STRING	B4SQH8.
Protein family/group databases
CAZy	GH18. Glycoside Hydrolase Family 18.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6477305.
GenomeReviews	Gene locus Smal_2809 in contig CP001111_GR.
KEGG	smt:Smal_2809.
PATRIC	23710576. VBISteMal40512_2826.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG700994.
OMA	NSKWADV.
ProtClustDB	CLSK2340305.
Family and domain databases
InterPro	IPR011583. Chitinase_II. IPR001223. Glyco_hydro18cat. IPR001579. Glyco_hydro_18_chit_AS. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
Pfam	PF00704. Glyco_hydro_18. 1 hit. [Graphical view]
SMART	SM00636. Glyco_18. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01095. CHITINASE_18. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B4SQH8_STRM5

Accession

Primary (citable) accession number: B4SQH8

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	January 25, 2012
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)