B4SMM1 (B4SMM1_STRM5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Error-prone DNA polymerase HAMAP MF_01902
EC=2.7.7.7 HAMAP MF_01902

Gene names

Name:	dnaE2 HAMAP MF_01902
Ordered Locus Names:	Smal_2380

Organism

Stenotrophomonas maltophilia (strain R551-3) [Complete proteome] [HAMAP] EMBL ACF52083.1

Taxonomic identifier

391008 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Stenotrophomonas › Stenotrophomonas maltophilia group

Protein attributes

Sequence length	1036 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase By similarity. HAMAP MF_01902
Catalytic activity	Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). HAMAP MF_01902 SAAS SAAS004013
Subcellular location	Cytoplasm By similarity HAMAP MF_01902 SAAS SAAS004013.
Sequence similarities	Belongs to the DNA polymerase type-C family. DnaE2 subfamily. HAMAP MF_01902

Ontologies

Keywords
Biological process	DNA damage DNA repair HAMAP MF_01902 SAAS SAAS004013 DNA replication HAMAP MF_01902 SAAS SAAS004013
Cellular component	Cytoplasm HAMAP MF_01902 SAAS SAAS004013
Molecular function	DNA-directed DNA polymerase HAMAP MF_01902 SAAS SAAS004013 Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA repair Inferred from electronic annotation. Source: HAMAP DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	3'-5' exonuclease activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B4SMM1 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: 20864DC4E14C07AA	FASTA	1,036	116,999
	10 20 30 40 50 60 MYNELPGYAE LHCLSAFSFQ RGASIAEELF ARAAGQGYRA LAITDECSLA GIVRAWQAAK 70 80 90 100 110 120 THGVALIVGA EFQVEDGPKL ALLCTDQAAY AGLCQLITTC RRRAAKGEYR CLREDLLGLP 130 140 150 160 170 180 DGLLCLWLDR QPAAIDLELL RAGFDDRLWL AVELHHEHDD ARRLQQLQAF GERHRLPLVA 190 200 210 220 230 240 SGDVHMHVRR RRALQDTLTA IRHRCSVAEA GWRLFPNGER HLRPRTALAQ LYPSELLAET 250 260 270 280 290 300 LRIAERCHFT LEQLQYTYPR ELVPEGHDPD SWLRVLVERG IPWRWKGGIE PAQRKQIEHE 310 320 330 340 350 360 LALIREKNYA SYFLTVQDIV RFARSQDILC QGRGSAANSA VCFVLGVTEI DPARSNLLFE 370 380 390 400 410 420 RFISAERDEP PDIDIDFEHE RREEVLQYVF KRYGRERAAL TAVAISYRGR SAIRDVARAL 430 440 450 460 470 480 GLPMDQVNEL GAAMDHWGGH VPLPETLRER GFDPETPLMR RLLALTAELI DFPRHLSQHP 490 500 510 520 530 540 GGFVISEHPL STLVPVENAA MADRTVIQWD KDDLDATGLM KVDCLALGML TAIRKCLAML 550 560 570 580 590 600 QQHGLHSGRM DAIEDDDKPT YDMICAADTI GVFQIESRAQ MAMLPRLQPR EFYDLVIEVA 610 620 630 640 650 660 IVRPGPIQGD MVHPYLERRR LLREQGPDAL NDPDNPLYPP QLKRVFARTL GVPLFQEQVM 670 680 690 700 710 720 QLAVDAAGYT PGEADALRRS MAAWKRRGGL EPHREKLLAG MLKNNFSREY GEHLFEQIKG 730 740 750 760 770 780 FGDYGFPESH AASFALLTYA SCWLKCHYPA AFTASLINSQ PLGFYSPDQL LQDARRHGIR 790 800 810 820 830 840 VLPVDVRHSD WDCTLDFSKG PAAIRLGLRL VDGCNEPAVR AIMRERARRP FDDVGDLCQR 850 860 870 880 890 900 TALDRRQQGL LADAGALRGL SGHRHRARWD ISGVENRLPL FDQARATAEA RVPLPLPSAW 910 920 930 940 950 960 EDMQADYRST GTTLGRHPIS FLRAQLRSRG CLDAAQLAGH GHGRRVRIAG LVRMRQRPQT 970 980 990 1000 1010 1020 ASGVTFLTLE DETGMVNAVV WRHLADRQHR VLVDTQLMQI DGRLERVDGV QHVIVQHMHC 1030 LDELLQGLRS HSRDFH

References

[1]

"Complete sequence of Stenotrophomonas maltophilia R551-3." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Taghavi S., Monchy S., Newman L., Vangronsveld J., van der Lelie D., Richardson P. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: R551-3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001111 Genomic DNA. Translation: ACF52083.1.
RefSeq	YP_002028766.1. NC_011071.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B4SMM1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6476863.
GenomeReviews	Gene locus Smal_2380 in contig CP001111_GR.
KEGG	smt:Smal_2380.
PATRIC	23709704. VBISteMal40512_2404.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG734490.
OMA	YRAKGAI.
ProtClustDB	PRK05672.
Family and domain databases
HAMAP	MF_01902. DNApol_error_prone. [Tree]
InterPro	IPR011708. DNA_pol3_alpha. IPR023073. DNA_pol_error_prone. IPR004365. NA-bd_OB_tRNA-helicase. IPR004013. PHP_C. IPR003141. Pol/His_phosphatase_N. IPR016195. Pol/histidinol_Pase-like. IPR004805. PolC_alpha. [Graphical view]
KO	K14162.
Pfam	PF07733. DNA_pol3_alpha. 1 hit. PF02811. PHP. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
SMART	SM00481. POLIIIAc. 1 hit. [Graphical view]
SUPFAM	SSF89550. PHP-like. 1 hit.
TIGRFAMs	TIGR00594. Polc. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B4SMM1_STRM5

Accession

Primary (citable) accession number: B4SMM1

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)