B4SJL5 (B4SJL5_STRM5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alginate lyase EMBL ACF51770.1

Gene names

Ordered Locus Names:

Smal_2066

Organism

Stenotrophomonas maltophilia (strain R551-3) [Complete proteome] [HAMAP] EMBL ACF51770.1

Taxonomic identifier

391008 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Stenotrophomonas › Stenotrophomonas maltophilia group

Protein attributes

Sequence length	479 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACF51770.1
Molecular function	Lyase EMBL ACF51770.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 35	35	Potential EMBL ACF51770.1
	Chain	36 – 479	444	Potential EMBL ACF51770.1		PRO_5000388951

Sequences

	Sequence		Length	Mass (Da)
	B4SJL5 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: 1066097E386781E8	FASTA	479	50,427
	10 20 30 40 50 60 MRIRSTHQPG SSCFIATCLT TGLALCLTTQ PASAASWLVH DMAEFATASA SLQPGDEIVL 70 80 90 100 110 120 ADGTWTDARL LLKGQGTDAA PIVLRAQTPG NVILSGRSDL RLAGRYLQVS NLVFRNGYAP 130 140 150 160 170 180 GDAVVAFRES SKAVASSSRV TGLVIDDYTN PDASDQDYWV SFYGSHNRLD HSQLRGKTNA 190 200 210 220 230 240 GPTVVVVRDA TQGLDNQHRI DHNWFGPRPA LGVNGGETIR VGTSDSSLSD SNSTVENNWF 250 260 270 280 290 300 EGCDGETEII SNKSGGNTYR GNVFYRSAGA LTLRHGNGNR VIDNVFLGDD KAGTGGVRII 310 320 330 340 350 360 NADQTVSNNY FERLAGSSNR SALAVMDAQA DPPLSGYAPV VNATISRNTF VDVAKISFGV 370 380 390 400 410 420 GHDEAKGIVV AASNSRFTGN LIVNRTSRNP PDAASSLAGI SFSGNLQSPQ ASPVFPGGIE 430 440 450 460 470 GRAVTLQQSA NELWVPAPAL PTVGADPGLA MTARTATGVD WYPKVGEVAL SRTSTGVDR

References

[1]

"Complete sequence of Stenotrophomonas maltophilia R551-3." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Taghavi S., Monchy S., Newman L., Vangronsveld J., van der Lelie D., Richardson P. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: R551-3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001111 Genomic DNA. Translation: ACF51770.1.
RefSeq	YP_002028453.1. NC_011071.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B4SJL5.
Protein family/group databases
CAZy	PL6. Polysaccharide Lyase Family 6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6476244.
GenomeReviews	Gene locus Smal_2066 in contig CP001111_GR.
KEGG	smt:Smal_2066.
PATRIC	23709071. VBISteMal40512_2088.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG700758.
OMA	GETEIIS.
ProtClustDB	CLSK2802791.
Family and domain databases
InterPro	IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KO	K01729.
SMART	SM00710. PbH1. 5 hits. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B4SJL5_STRM5

Accession

Primary (citable) accession number: B4SJL5

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)