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B4SFQ0 (B4SFQ0_PELPB) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Ppha_1021 EMBL ACF43305.1
OrganismPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) [Complete proteome] [HAMAP] EMBL ACF43305.1
Taxonomic identifier324925 [NCBI]
Taxonomic lineageBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupPelodictyon

Protein attributes

Sequence length564 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B4SFQ0 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: CC6DA3D154B0544B

FASTA56463,778
        10         20         30         40         50         60 
MKDLSEIAIL FVDDEQDTLG SLSRFLRKEP YIKHFTTSGK EALQLLETHD IQILLTDLRM 

        70         80         90        100        110        120 
PEMSGMELIN RIKISHPDIV RVILSGIHDI DQIIESINTG EVFRFIPKPI EPQGFKKIIT 

       130        140        150        160        170        180 
DAIDYYQLKT EREMLFDQLE TKNKELSKAN DARCVMSAEL RQSEAQFRTM NDSAFDPIFL 

       190        200        210        220        230        240 
LNEQGFIVYV NLAAETIFGI TERAFHLKKF TDIISPQPDS CSLYNACKKP FQNLASLRNG 

       250        260        270        280        290        300 
NVRQIEGIKK DGGTIPLEVT TGTVMLDSVH HTVIIARDIS SRIEEEKSRV RYEHMQQELE 

       310        320        330        340        350        360 
AQIEQKLLQS TIPNSLDGAL MGQFTVSSGH LNGDFAEFIL YDNKHADIII GDVMGHGILS 

       370        380        390        400        410        420 
ALVGAGLKTL FLKTVAQQKH QRHKLPELQD IVTNVHKQCI LELLEIGIYA TLLFIRLDLE 

       430        440        450        460        470        480 
NMEFSMIDCG HTPSIHFHAD EGVCTLLKGE NLPVGMIEKQ EYQTITFPLE QDDILVMYSD 

       490        500        510        520        530        540 
GITESLLPDN TLFGTERLSD LIAQYHKLQP EALVEKISNH VFELTGRRTF DDDATCIVIR 

       550        560 
IGSLKSSMKF APDERKIESG TLVG 

« Hide

References

[1]"Complete sequence of Pelodictyon phaeoclathratiforme BU-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 5477 / BU-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001110 Genomic DNA. Translation: ACF43305.1.
RefSeqYP_002017922.1. NC_011060.1.

3D structure databases

ProteinModelPortalB4SFQ0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING324925.Ppha_1021.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACF43305; ACF43305; Ppha_1021.
GeneID6461239.
KEGGpph:Ppha_1021.
PATRIC22902546. VBIPelPha134556_1060.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2208.
HOGENOMHOG000153161.
OMACCYPARE.
OrthoDBEOG6S267M.
ProtClustDBCLSK770372.

Enzyme and pathway databases

BioCycPPHA324925:GHBF-1040-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR011006. CheY-like_superfamily.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00989. PAS. 1 hit.
PF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50112. PAS. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4SFQ0_PELPB
AccessionPrimary (citable) accession number: B4SFQ0
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 16, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)