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B4SFQ0

- B4SFQ0_PELPB

UniProt

B4SFQ0 - B4SFQ0_PELPB

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Protein
Submitted name:

Putative PAS/PAC sensor protein

Gene
Ppha_1021
Organism
Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. phosphorelay response regulator activity Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPPHA324925:GHBF-1040-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative PAS/PAC sensor proteinImported
Gene namesi
Ordered Locus Names:Ppha_1021Imported
OrganismiPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)Imported
Taxonomic identifieri324925 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupPelodictyon
ProteomesiUP000002724: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi324925.Ppha_1021.

Structurei

3D structure databases

ProteinModelPortaliB4SFQ0.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000153161.
OMAiCCYPARE.
OrthoDBiEOG6S267M.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00989. PAS. 1 hit.
PF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4SFQ0-1 [UniParc]FASTAAdd to Basket

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MKDLSEIAIL FVDDEQDTLG SLSRFLRKEP YIKHFTTSGK EALQLLETHD    50
IQILLTDLRM PEMSGMELIN RIKISHPDIV RVILSGIHDI DQIIESINTG 100
EVFRFIPKPI EPQGFKKIIT DAIDYYQLKT EREMLFDQLE TKNKELSKAN 150
DARCVMSAEL RQSEAQFRTM NDSAFDPIFL LNEQGFIVYV NLAAETIFGI 200
TERAFHLKKF TDIISPQPDS CSLYNACKKP FQNLASLRNG NVRQIEGIKK 250
DGGTIPLEVT TGTVMLDSVH HTVIIARDIS SRIEEEKSRV RYEHMQQELE 300
AQIEQKLLQS TIPNSLDGAL MGQFTVSSGH LNGDFAEFIL YDNKHADIII 350
GDVMGHGILS ALVGAGLKTL FLKTVAQQKH QRHKLPELQD IVTNVHKQCI 400
LELLEIGIYA TLLFIRLDLE NMEFSMIDCG HTPSIHFHAD EGVCTLLKGE 450
NLPVGMIEKQ EYQTITFPLE QDDILVMYSD GITESLLPDN TLFGTERLSD 500
LIAQYHKLQP EALVEKISNH VFELTGRRTF DDDATCIVIR IGSLKSSMKF 550
APDERKIESG TLVG 564
Length:564
Mass (Da):63,778
Last modified:September 23, 2008 - v1
Checksum:iCC6DA3D154B0544B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001110 Genomic DNA. Translation: ACF43305.1.
RefSeqiYP_002017922.1. NC_011060.1.

Genome annotation databases

EnsemblBacteriaiACF43305; ACF43305; Ppha_1021.
GeneIDi6461239.
KEGGipph:Ppha_1021.
PATRICi22902546. VBIPelPha134556_1060.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001110 Genomic DNA. Translation: ACF43305.1 .
RefSeqi YP_002017922.1. NC_011060.1.

3D structure databases

ProteinModelPortali B4SFQ0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 324925.Ppha_1021.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACF43305 ; ACF43305 ; Ppha_1021 .
GeneIDi 6461239.
KEGGi pph:Ppha_1021.
PATRICi 22902546. VBIPelPha134556_1060.

Phylogenomic databases

eggNOGi COG2208.
HOGENOMi HOG000153161.
OMAi CCYPARE.
OrthoDBi EOG6S267M.

Enzyme and pathway databases

BioCyci PPHA324925:GHBF-1040-MONOMER.

Family and domain databases

Gene3Di 3.60.40.10. 1 hit.
InterProi IPR011006. CheY-like_superfamily.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view ]
Pfami PF00989. PAS. 1 hit.
PF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view ]
SMARTi SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view ]
SUPFAMi SSF52172. SSF52172. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsi TIGR00229. sensory_box. 1 hit.
PROSITEi PS50112. PAS. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Pelodictyon phaeoclathratiforme BU-1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F.
    , Overmann J., Bryant D.A., Richardson P.
    Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 5477 / BU-1.

Entry informationi

Entry nameiB4SFQ0_PELPB
AccessioniPrimary (citable) accession number: B4SFQ0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: May 14, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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