B4SF17 (B4SF17_PELPB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent EMBL ACF43164.1
EC=1.17.4.1 EMBL ACF43164.1

Gene names

Ordered Locus Names:

Ppha_0876

Organism

Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) [Complete proteome] [HAMAP]

Taxonomic identifier

324925 [NCBI]

Taxonomic lineage

Bacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Pelodictyon

Protein attributes

Sequence length	1141 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ACF43164.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: InterPro
Cellular component	ribonucleoside-diphosphate reductase complex Inferred from electronic annotation. Source: InterPro
Molecular function	cobalamin binding Inferred from electronic annotation. Source: InterPro cobalt ion binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro ribonucleoside-diphosphate reductase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B4SF17 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: A0B64F6B68541758	FASTA	1,141	126,449
	10 20 30 40 50 60 MKISRLFTSP GENVYDCFEY TFRTSVLRNP DGSKVFEMNN IEVPKQWSQV AADILAQKYF 70 80 90 100 110 120 RKTGIPLFDE KGAAVTDSAG NPVTGSEHSI RQVVHRMAGC WRDWGEKNRY FDTPDDAAAF 130 140 150 160 170 180 YDEVAFMMLR QMAAPNSPQW FNTGLNFAYG TTGPAQGHFY VDPESGEVKE SEDAYGRPQA 190 200 210 220 230 240 HACFIQSVSD DLVNDGGIFD LAIREARVFK FGSGSGTNYS NLRSGGEKLS GGGSSSGLMS 250 260 270 280 290 300 FLKIFDSAAG AIKSGGTTRR AAKMVIVDID HPDVEKFIEW KAKEEDKVAS LVAGSRICSR 310 320 330 340 350 360 FLQAIVEEAL ANGADRKANP QLHRLIQNAL SRAVPMSYIV RVLALVEQGY TTLDFEEYTS 370 380 390 400 410 420 NYESEAYQTV GGQNSNNTVR MTNEFMKAVE NDDVWSLRER TTGKTARVVK ARDLWEKILL 430 440 450 460 470 480 SSWKCADPGL QFDTTINEWH TCPKSGRINA SNPCSEYMFL DDTACNLASL NLIHFIDEAS 490 500 510 520 530 540 GRMKVKELQH ASALWAVVLE ISVLMAHFPS REIARLSYEF RTLGLGFANL GTVLMVLGIP 550 560 570 580 590 600 YDSPRALALA GAISAVMTGQ AYVTSAEMAH DLGAFSGYEA NREEMLRVIR NHRRAARNMS 610 620 630 640 650 660 EEEYEGLSVK PRGIDSEYCP GELFEAAGKV WDLALEKGMQ YGFRNAQVSV IAPTGTIGLV 670 680 690 700 710 720 MDCDTTGIEP EFAIVKFKKL AGGGYFKIVN QSVHKALERL GYTPAQIDDI EHYCKGHGTL 730 740 750 760 770 780 SGSPSLNRQW LKSRGFPDDK IEIVESQLEA VFDIRFAFNK WILGEDFCAA LGFTEEQLNN 790 800 810 820 830 840 PDFDMLLALG ATEQDAELAN DYICGTMTIE GAPHLKLEHL PVFDCASRCG RKGLRYIKHM 850 860 870 880 890 900 AHVRMMSAVQ PFISGAISKT VNMPGTATTV EIGEVFQAAW LQMVKAITIY RDGSKLSQPL 910 920 930 940 950 960 NISSYQDLDE IIMLGTEESL DETKGPREVQ ERIVERVYHR SERRMLPKRR KGYIREAYVG 970 980 990 1000 1010 1020 GHKVFLRTGE YDDGSLGEVF IDMYKEGASF KGLLNCFAVL ASKALQYGMP LEELVDSFTF 1030 1040 1050 1060 1070 1080 TRFEPAGAVQ GHNAIKNSTS ILDYVFRSIG YDYLGRKDFV HVKAVDEVLE SNGENGHAQV 1090 1100 1110 1120 1130 1140 AVPSLAVHAQ PEHSATRNSQ VYQAKVQGYT GEQCENCGSM RVKQNGTCKV CDDCGMTTGC S

References

[1]

"Complete sequence of Pelodictyon phaeoclathratiforme BU-1." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F. , Overmann J., Bryant D.A., Richardson P. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 5477 / BU-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001110 Genomic DNA. Translation: ACF43164.1.
RefSeq	YP_002017781.1. NC_011060.1.
3D structure databases
ProteinModelPortal	B4SF17.
ModBase	Search...
Protein-protein interaction databases
STRING	B4SF17.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6461078.
GenomeReviews	Gene locus Ppha_0876 in contig CP001110_GR.
KEGG	pph:Ppha_0876.
PATRIC	22902230. VBIPelPha134556_0902.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG414188.
OMA	FLWRSVP.
ProtClustDB	PRK07562.
Family and domain databases
InterPro	IPR002876. DUF28. IPR017856. Integrase_Zn-bd_dom-like_N. IPR013344. RDP_Rdtase_AdoCbl-dep. IPR000788. Ribncl_red_lg_C. IPR013678. Ribonuc_red_2_N. IPR024434. TSCPD_dom. [Graphical view]
Gene3D	G3DSA:1.10.10.200. Intgrase_N_Zn_bd. 1 hit.
KO	K00525.
Pfam	PF08471. Ribonuc_red_2_N. 1 hit. PF02867. Ribonuc_red_lgC. 2 hits. PF12637. TSCPD. 1 hit. [Graphical view]
PRINTS	PR01183. RIBORDTASEM1.
SUPFAM	SSF75625. DUF28. 1 hit.
TIGRFAMs	TIGR02504. NrdJ_Z. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B4SF17_PELPB

Accession

Primary (citable) accession number: B4SF17

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)