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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Ppha_2334

Organism
Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciPPHA324925:GHBF-2379-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Ppha_2334Imported
OrganismiPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)Imported
Taxonomic identifieri324925 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupPelodictyon
ProteomesiUP000002724 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi324925.Ppha_2334.

Structurei

3D structure databases

ProteinModelPortaliB4SEB0.
SMRiB4SEB0. Positions 1-427.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

B4SEB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTEDIKGFF ASREQLDMAD YLTLDYYLEC VGDIETALAH FCSEQSTAQW
60 70 80 90 100
KRVDHDEDFR PKYAARVISL TIEGELEALS YPVVHFETGP IHACRVTIAH
110 120 130 140 150
PHRNFGAKLP NLLTAVCGEG VFFTPGVPVV KLLDIGFPEA YLRAFDGPKF
160 170 180 190 200
GIDGIRDLLQ AYDRPIFFGV VKPNIGLSPA NFAEIAYQSW LGGLDIAKDD
210 220 230 240 250
EMLADVDWSS LIERSRVLGE ARARAEKETG EPKIYLANVT DEVDRLLEQH
260 270 280 290 300
DIAVSNGANA LLINALPVGL SAVRMLARHT KVPLIGHFPF IAAFSRMEKY
310 320 330 340 350
GVHSRVMTKL QRLAGLDSII MPGFGSRMMT PEEEVKDNIA ECLQEFGHIR
360 370 380 390 400
RSLPVPGGSD SALTLETVYR KVGSVDFGFV PGRGIFGHPM GPRAGAMSIR
410 420 430
QAWEAIEQGI SLETYAVGRP ELEVMVDGIN RKK
Length:433
Mass (Da):47,880
Last modified:September 23, 2008 - v1
Checksum:i297AA1D4A1F991A2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001110 Genomic DNA. Translation: ACF44529.1.
RefSeqiWP_012509004.1. NC_011060.1.

Genome annotation databases

EnsemblBacteriaiACF44529; ACF44529; Ppha_2334.
KEGGipph:Ppha_2334.
PATRICi22905453. VBIPelPha134556_2491.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001110 Genomic DNA. Translation: ACF44529.1.
RefSeqiWP_012509004.1. NC_011060.1.

3D structure databases

ProteinModelPortaliB4SEB0.
SMRiB4SEB0. Positions 1-427.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi324925.Ppha_2334.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACF44529; ACF44529; Ppha_2334.
KEGGipph:Ppha_2334.
PATRICi22905453. VBIPelPha134556_2491.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciPPHA324925:GHBF-2379-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Pelodictyon phaeoclathratiforme BU-1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F.
    , Overmann J., Bryant D.A., Richardson P.
    Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 5477 / BU-1Imported.

Entry informationi

Entry nameiB4SEB0_PELPB
AccessioniPrimary (citable) accession number: B4SEB0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 22, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.