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B4SEB0 (B4SEB0_PELPB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length433 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ACF44529.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B4SEB0 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 297AA1D4A1F991A2

FASTA43347,880
        10         20         30         40         50         60 
MNTEDIKGFF ASREQLDMAD YLTLDYYLEC VGDIETALAH FCSEQSTAQW KRVDHDEDFR 

        70         80         90        100        110        120 
PKYAARVISL TIEGELEALS YPVVHFETGP IHACRVTIAH PHRNFGAKLP NLLTAVCGEG 

       130        140        150        160        170        180 
VFFTPGVPVV KLLDIGFPEA YLRAFDGPKF GIDGIRDLLQ AYDRPIFFGV VKPNIGLSPA 

       190        200        210        220        230        240 
NFAEIAYQSW LGGLDIAKDD EMLADVDWSS LIERSRVLGE ARARAEKETG EPKIYLANVT 

       250        260        270        280        290        300 
DEVDRLLEQH DIAVSNGANA LLINALPVGL SAVRMLARHT KVPLIGHFPF IAAFSRMEKY 

       310        320        330        340        350        360 
GVHSRVMTKL QRLAGLDSII MPGFGSRMMT PEEEVKDNIA ECLQEFGHIR RSLPVPGGSD 

       370        380        390        400        410        420 
SALTLETVYR KVGSVDFGFV PGRGIFGHPM GPRAGAMSIR QAWEAIEQGI SLETYAVGRP 

       430 
ELEVMVDGIN RKK 

« Hide

References

[1]"Complete sequence of Pelodictyon phaeoclathratiforme BU-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 5477 / BU-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001110 Genomic DNA. Translation: ACF44529.1.
RefSeqYP_002019146.1. NC_011060.1.

3D structure databases

ProteinModelPortalB4SEB0.
SMRB4SEB0. Positions 1-427.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING324925.Ppha_2334.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACF44529; ACF44529; Ppha_2334.
GeneID6461708.
KEGGpph:Ppha_2334.
PATRIC22905453. VBIPelPha134556_2491.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMALDYYLEC.
OrthoDBEOG62K1SK.

Enzyme and pathway databases

BioCycPPHA324925:GHBF-2379-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB4SEB0_PELPB
AccessionPrimary (citable) accession number: B4SEB0
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)