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B4SCL7

- B4SCL7_PELPB

UniProt

B4SCL7 - B4SCL7_PELPB

Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 subunit

Gene

Ppha_2010

Organism
Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Enzyme and pathway databases

    BioCyciPPHA324925:GHBF-2049-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2-oxoglutarate dehydrogenase, E1 subunitImported (EC:1.2.4.2Imported)
    Gene namesi
    Ordered Locus Names:Ppha_2010Imported
    OrganismiPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)Imported
    Taxonomic identifieri324925 [NCBI]
    Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupPelodictyon
    ProteomesiUP000002724: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi324925.Ppha_2010.

    Structurei

    3D structure databases

    ProteinModelPortaliB4SCL7.
    SMRiB4SCL7. Positions 88-934.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0567.
    HOGENOMiHOG000259586.
    KOiK00164.
    OMAiDDVEACT.
    OrthoDBiEOG6V1M1F.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B4SCL7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMQQYSSNSY LFGGNAPYIE DLYEAYLDNP ASVSESWRAY FDAMQHVPGA    50
    NGDARDIAHS PVQASFAERA RLGPICRVIA SPDAELGRKR VSVQKLIAAY 100
    RNIGSRWANL DPLKRQERPA LPDLEPSFYG FSDTDMDIVF NTSNTYFGKE 150
    TMPLRELLQN LRETYCGTLG IEFMYITDQT EKRWWQAKLE TIRSKPDFST 200
    EKKKHILERL TAAEGFERYL HTRFIGQKRF SLEGGDSFIA SMDELIQRAG 250
    KAGVQEIVIG MAHRGRLNVL VNIMGKNPLD LFAEFEGKHA DDLPSGDVKY 300
    HQGFTSDLAT PGGPINLSLA FNPSHLEIVN PVVEGAVKAR QVRRGDRDGS 350
    QVLPILVHGD AAFSGQGVIM ETLNLALTRG YGTGGTVHIV INNQIGFTTS 400
    DPRDSRSTTY CTDVVKMIEA PVLHVNGDDP ESVVLATQMA LDYRQAFKRD 450
    VVIDIICFRK LGHNEQDTPA MTQPLMYKKI AQHPGTRKLY AERLESQGVI 500
    GEAYGAELSK QFRKDLDAGK YSTNPVLVNK TIFTAEPTAG RNEASETGVP 550
    LAELKRLSEM LTKIPEGFKL HPLVEKVVTD RARMGRGEQP LDWGMGEHLA 600
    FASLVAGGYP IRITGQDSGR ATFSHRHAVF HDQNREKWDS GTYIPLQNIA 650
    DNQATFTVID SVLSEEAVLG FEYGYSISAP DTLVIWEAQF GDFANGAQVL 700
    IDQFITSGEV KWGLASGLTL MLPHGYEGQG PEHSSARPER FLQLCAENNI 750
    QVCQPSNPAQ IFHLLRRQMT TMRRKPLIIL TPKSLLRNKD AVSQLADLSQ 800
    GNFRNIIGDA TAAHEKVERL IACSGKVYYD LINRRQENTQ EKVAIIRIEQ 850
    LYPFPFDEFK GVLDHYPKLK EIVWCQDEPK NQGYWRFLQH YIMNAMSPGQ 900
    QFGYAGRLAS ASTACGYAAT HAIQQKALLD QAFGEFSVFF NK 942
    Length:942
    Mass (Da):105,288
    Last modified:September 23, 2008 - v1
    Checksum:iEE3BFBFDA88DC55A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001110 Genomic DNA. Translation: ACF44222.1.
    RefSeqiYP_002018839.1. NC_011060.1.

    Genome annotation databases

    EnsemblBacteriaiACF44222; ACF44222; Ppha_2010.
    GeneIDi6462949.
    KEGGipph:Ppha_2010.
    PATRICi22904772. VBIPelPha134556_2158.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001110 Genomic DNA. Translation: ACF44222.1 .
    RefSeqi YP_002018839.1. NC_011060.1.

    3D structure databases

    ProteinModelPortali B4SCL7.
    SMRi B4SCL7. Positions 88-934.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 324925.Ppha_2010.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACF44222 ; ACF44222 ; Ppha_2010 .
    GeneIDi 6462949.
    KEGGi pph:Ppha_2010.
    PATRICi 22904772. VBIPelPha134556_2158.

    Phylogenomic databases

    eggNOGi COG0567.
    HOGENOMi HOG000259586.
    KOi K00164.
    OMAi DDVEACT.
    OrthoDBi EOG6V1M1F.

    Enzyme and pathway databases

    BioCyci PPHA324925:GHBF-2049-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Pelodictyon phaeoclathratiforme BU-1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F.
      , Overmann J., Bryant D.A., Richardson P.
      Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 5477 / BU-1Imported.

    Entry informationi

    Entry nameiB4SCL7_PELPB
    AccessioniPrimary (citable) accession number: B4SCL7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3