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B4SCL7

- B4SCL7_PELPB

UniProt

B4SCL7 - B4SCL7_PELPB

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Protein
Submitted name: 2-oxoglutarate dehydrogenase, E1 subunit
Gene
Ppha_2010
Organism
Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciPPHA324925:GHBF-2049-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 subunitImported (EC:1.2.4.2Imported)
Gene namesi
Ordered Locus Names:Ppha_2010Imported
OrganismiPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)Imported
Taxonomic identifieri324925 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupPelodictyon
ProteomesiUP000002724: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi324925.Ppha_2010.

Structurei

3D structure databases

ProteinModelPortaliB4SCL7.
SMRiB4SCL7. Positions 88-934.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiDDVEACT.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

B4SCL7-1 [UniParc]FASTAAdd to Basket

« Hide

MMQQYSSNSY LFGGNAPYIE DLYEAYLDNP ASVSESWRAY FDAMQHVPGA    50
NGDARDIAHS PVQASFAERA RLGPICRVIA SPDAELGRKR VSVQKLIAAY 100
RNIGSRWANL DPLKRQERPA LPDLEPSFYG FSDTDMDIVF NTSNTYFGKE 150
TMPLRELLQN LRETYCGTLG IEFMYITDQT EKRWWQAKLE TIRSKPDFST 200
EKKKHILERL TAAEGFERYL HTRFIGQKRF SLEGGDSFIA SMDELIQRAG 250
KAGVQEIVIG MAHRGRLNVL VNIMGKNPLD LFAEFEGKHA DDLPSGDVKY 300
HQGFTSDLAT PGGPINLSLA FNPSHLEIVN PVVEGAVKAR QVRRGDRDGS 350
QVLPILVHGD AAFSGQGVIM ETLNLALTRG YGTGGTVHIV INNQIGFTTS 400
DPRDSRSTTY CTDVVKMIEA PVLHVNGDDP ESVVLATQMA LDYRQAFKRD 450
VVIDIICFRK LGHNEQDTPA MTQPLMYKKI AQHPGTRKLY AERLESQGVI 500
GEAYGAELSK QFRKDLDAGK YSTNPVLVNK TIFTAEPTAG RNEASETGVP 550
LAELKRLSEM LTKIPEGFKL HPLVEKVVTD RARMGRGEQP LDWGMGEHLA 600
FASLVAGGYP IRITGQDSGR ATFSHRHAVF HDQNREKWDS GTYIPLQNIA 650
DNQATFTVID SVLSEEAVLG FEYGYSISAP DTLVIWEAQF GDFANGAQVL 700
IDQFITSGEV KWGLASGLTL MLPHGYEGQG PEHSSARPER FLQLCAENNI 750
QVCQPSNPAQ IFHLLRRQMT TMRRKPLIIL TPKSLLRNKD AVSQLADLSQ 800
GNFRNIIGDA TAAHEKVERL IACSGKVYYD LINRRQENTQ EKVAIIRIEQ 850
LYPFPFDEFK GVLDHYPKLK EIVWCQDEPK NQGYWRFLQH YIMNAMSPGQ 900
QFGYAGRLAS ASTACGYAAT HAIQQKALLD QAFGEFSVFF NK 942
Length:942
Mass (Da):105,288
Last modified:September 23, 2008 - v1
Checksum:iEE3BFBFDA88DC55A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001110 Genomic DNA. Translation: ACF44222.1.
RefSeqiYP_002018839.1. NC_011060.1.

Genome annotation databases

EnsemblBacteriaiACF44222; ACF44222; Ppha_2010.
GeneIDi6462949.
KEGGipph:Ppha_2010.
PATRICi22904772. VBIPelPha134556_2158.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001110 Genomic DNA. Translation: ACF44222.1 .
RefSeqi YP_002018839.1. NC_011060.1.

3D structure databases

ProteinModelPortali B4SCL7.
SMRi B4SCL7. Positions 88-934.
ModBasei Search...

Protein-protein interaction databases

STRINGi 324925.Ppha_2010.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACF44222 ; ACF44222 ; Ppha_2010 .
GeneIDi 6462949.
KEGGi pph:Ppha_2010.
PATRICi 22904772. VBIPelPha134556_2158.

Phylogenomic databases

eggNOGi COG0567.
HOGENOMi HOG000259586.
KOi K00164.
OMAi DDVEACT.
OrthoDBi EOG6V1M1F.

Enzyme and pathway databases

BioCyci PPHA324925:GHBF-2049-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Pelodictyon phaeoclathratiforme BU-1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F.
    , Overmann J., Bryant D.A., Richardson P.
    Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 5477 / BU-1.

Entry informationi

Entry nameiB4SCL7_PELPB
AccessioniPrimary (citable) accession number: B4SCL7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 11, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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