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Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 subunit

Gene

Ppha_2010

Organism
Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciPPHA324925:GHBF-2049-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 subunitImported (EC:1.2.4.2Imported)
Gene namesi
Ordered Locus Names:Ppha_2010Imported
OrganismiPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)Imported
Taxonomic identifieri324925 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupPelodictyon
ProteomesiUP000002724: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi324925.Ppha_2010.

Structurei

3D structure databases

ProteinModelPortaliB4SCL7.
SMRiB4SCL7. Positions 88-934.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

B4SCL7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMQQYSSNSY LFGGNAPYIE DLYEAYLDNP ASVSESWRAY FDAMQHVPGA
60 70 80 90 100
NGDARDIAHS PVQASFAERA RLGPICRVIA SPDAELGRKR VSVQKLIAAY
110 120 130 140 150
RNIGSRWANL DPLKRQERPA LPDLEPSFYG FSDTDMDIVF NTSNTYFGKE
160 170 180 190 200
TMPLRELLQN LRETYCGTLG IEFMYITDQT EKRWWQAKLE TIRSKPDFST
210 220 230 240 250
EKKKHILERL TAAEGFERYL HTRFIGQKRF SLEGGDSFIA SMDELIQRAG
260 270 280 290 300
KAGVQEIVIG MAHRGRLNVL VNIMGKNPLD LFAEFEGKHA DDLPSGDVKY
310 320 330 340 350
HQGFTSDLAT PGGPINLSLA FNPSHLEIVN PVVEGAVKAR QVRRGDRDGS
360 370 380 390 400
QVLPILVHGD AAFSGQGVIM ETLNLALTRG YGTGGTVHIV INNQIGFTTS
410 420 430 440 450
DPRDSRSTTY CTDVVKMIEA PVLHVNGDDP ESVVLATQMA LDYRQAFKRD
460 470 480 490 500
VVIDIICFRK LGHNEQDTPA MTQPLMYKKI AQHPGTRKLY AERLESQGVI
510 520 530 540 550
GEAYGAELSK QFRKDLDAGK YSTNPVLVNK TIFTAEPTAG RNEASETGVP
560 570 580 590 600
LAELKRLSEM LTKIPEGFKL HPLVEKVVTD RARMGRGEQP LDWGMGEHLA
610 620 630 640 650
FASLVAGGYP IRITGQDSGR ATFSHRHAVF HDQNREKWDS GTYIPLQNIA
660 670 680 690 700
DNQATFTVID SVLSEEAVLG FEYGYSISAP DTLVIWEAQF GDFANGAQVL
710 720 730 740 750
IDQFITSGEV KWGLASGLTL MLPHGYEGQG PEHSSARPER FLQLCAENNI
760 770 780 790 800
QVCQPSNPAQ IFHLLRRQMT TMRRKPLIIL TPKSLLRNKD AVSQLADLSQ
810 820 830 840 850
GNFRNIIGDA TAAHEKVERL IACSGKVYYD LINRRQENTQ EKVAIIRIEQ
860 870 880 890 900
LYPFPFDEFK GVLDHYPKLK EIVWCQDEPK NQGYWRFLQH YIMNAMSPGQ
910 920 930 940
QFGYAGRLAS ASTACGYAAT HAIQQKALLD QAFGEFSVFF NK
Length:942
Mass (Da):105,288
Last modified:September 23, 2008 - v1
Checksum:iEE3BFBFDA88DC55A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001110 Genomic DNA. Translation: ACF44222.1.
RefSeqiYP_002018839.1. NC_011060.1.

Genome annotation databases

EnsemblBacteriaiACF44222; ACF44222; Ppha_2010.
GeneIDi6462949.
KEGGipph:Ppha_2010.
PATRICi22904772. VBIPelPha134556_2158.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001110 Genomic DNA. Translation: ACF44222.1.
RefSeqiYP_002018839.1. NC_011060.1.

3D structure databases

ProteinModelPortaliB4SCL7.
SMRiB4SCL7. Positions 88-934.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi324925.Ppha_2010.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACF44222; ACF44222; Ppha_2010.
GeneIDi6462949.
KEGGipph:Ppha_2010.
PATRICi22904772. VBIPelPha134556_2158.

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Enzyme and pathway databases

BioCyciPPHA324925:GHBF-2049-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Pelodictyon phaeoclathratiforme BU-1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F.
    , Overmann J., Bryant D.A., Richardson P.
    Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 5477 / BU-1Imported.

Entry informationi

Entry nameiB4SCL7_PELPB
AccessioniPrimary (citable) accession number: B4SCL7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: January 7, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.