B4SC83 (GLGA_PELPB) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glycogen synthase
EC=2.4.1.21

Alternative name(s):
Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	Ppha_0330

Organism

Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) [Complete proteome] [HAMAP]

Taxonomic identifier

324925 [NCBI]

Taxonomic lineage

Bacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Pelodictyon

Protein attributes

Sequence length	489 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	starch synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 489	489	Glycogen synthase HAMAP MF_00484		PRO_1000126089
Sites
	Binding site	20	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	B4SC83 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: 025C5AE2C0BFE799	FASTA	489	55,604
	10 20 30 40 50 60 MSRRNFKVLY VSGEVSPFVR ISPLADFMAS FPQAIEEEGF EARIMMPKYG TINDRKFRLH 70 80 90 100 110 120 DVLRLSDIEV DLKEKVDLLN VKVTALPSSK IQTYFLYNEK YFKRNGLFTD IHNGSDLKGS 130 140 150 160 170 180 TDKVVFFNVG VLETLQRLGW KPDIIHCHDW HAALIPLLLK TVYASHEFFR DIKTVFTIHN 190 200 210 220 230 240 IYRQGILPMK AFQKLLPEEV SSALHCSNDE VNMLYTGVEH ADLLTTTSKV YAEEIVHDGL 250 260 270 280 290 300 QTYGLGRVLE EHQAKFYGIL NGIDSRQWNS AADKLIKKRY SLEHMDGKLD NKKALLEEAG 310 320 330 340 350 360 LPYTEGTPVV GVILNFDEFQ GAELLQQSLE QLAALDIQLI ISGSGDKKYE KVFQDFALEH 370 380 390 400 410 420 PEQVSVHGEY SDSFFHLAIA GLDILLMPGM IESCGMIQMF AMNYGTIPVA YAGGGIVETI 430 440 450 460 470 480 EERDEESGSG FIFHDYSAES LVGKLEEALA CFHDEESWQQ IVMTAMTRDF TWKKSAEEYD QLYRELLEP

References

[1]

"Complete sequence of Pelodictyon phaeoclathratiforme BU-1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F. , Overmann J., Bryant D.A., Richardson P. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 5477 / BU-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001110 Genomic DNA. Translation: ACF42663.1.
RefSeq	YP_002017280.1. NC_011060.1.
3D structure databases
ProteinModelPortal	B4SC83.
ModBase	Search...
Protein-protein interaction databases
STRING	B4SC83.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6460881.
GenomeReviews	Gene locus Ppha_0330 in contig CP001110_GR.
KEGG	pph:Ppha_0330.
PATRIC	22901094. VBIPelPha134556_0342.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG596384.
OMA	HAHDWPA.
ProtClustDB	PRK14098.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_PELPB

Accession

Primary (citable) accession number: B4SC83

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	September 23, 2008
Last modified:	January 25, 2012
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program