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B4SC83

- GLGA_PELPB

UniProt

B4SC83 - GLGA_PELPB

Protein

Glycogen synthase

Gene

glgA

Organism
Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

    Catalytic activityi

    ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei20 – 201ADP-glucoseUniRule annotation

    GO - Molecular functioni

    1. starch synthase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    BioCyciPPHA324925:GHBF-343-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiGT5. Glycosyltransferase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
    Alternative name(s):
    Starch [bacterial glycogen] synthaseUniRule annotation
    Gene namesi
    Name:glgAUniRule annotation
    Ordered Locus Names:Ppha_0330
    OrganismiPelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1)
    Taxonomic identifieri324925 [NCBI]
    Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupPelodictyon
    ProteomesiUP000002724: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 489489Glycogen synthasePRO_1000126089Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi324925.Ppha_0330.

    Structurei

    3D structure databases

    ProteinModelPortaliB4SC83.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0297.
    HOGENOMiHOG000294940.
    KOiK00703.
    OMAiHEMVQNC.
    OrthoDBiEOG6JTC6Z.

    Family and domain databases

    HAMAPiMF_00484. Glycogen_synth.
    InterProiIPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view]
    PfamiPF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02095. glgA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B4SC83-1 [UniParc]FASTAAdd to Basket

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    MSRRNFKVLY VSGEVSPFVR ISPLADFMAS FPQAIEEEGF EARIMMPKYG    50
    TINDRKFRLH DVLRLSDIEV DLKEKVDLLN VKVTALPSSK IQTYFLYNEK 100
    YFKRNGLFTD IHNGSDLKGS TDKVVFFNVG VLETLQRLGW KPDIIHCHDW 150
    HAALIPLLLK TVYASHEFFR DIKTVFTIHN IYRQGILPMK AFQKLLPEEV 200
    SSALHCSNDE VNMLYTGVEH ADLLTTTSKV YAEEIVHDGL QTYGLGRVLE 250
    EHQAKFYGIL NGIDSRQWNS AADKLIKKRY SLEHMDGKLD NKKALLEEAG 300
    LPYTEGTPVV GVILNFDEFQ GAELLQQSLE QLAALDIQLI ISGSGDKKYE 350
    KVFQDFALEH PEQVSVHGEY SDSFFHLAIA GLDILLMPGM IESCGMIQMF 400
    AMNYGTIPVA YAGGGIVETI EERDEESGSG FIFHDYSAES LVGKLEEALA 450
    CFHDEESWQQ IVMTAMTRDF TWKKSAEEYD QLYRELLEP 489
    Length:489
    Mass (Da):55,604
    Last modified:September 23, 2008 - v1
    Checksum:i025C5AE2C0BFE799
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001110 Genomic DNA. Translation: ACF42663.1.
    RefSeqiWP_012507158.1. NC_011060.1.
    YP_002017280.1. NC_011060.1.

    Genome annotation databases

    EnsemblBacteriaiACF42663; ACF42663; Ppha_0330.
    GeneIDi6460881.
    KEGGipph:Ppha_0330.
    PATRICi22901094. VBIPelPha134556_0342.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001110 Genomic DNA. Translation: ACF42663.1 .
    RefSeqi WP_012507158.1. NC_011060.1.
    YP_002017280.1. NC_011060.1.

    3D structure databases

    ProteinModelPortali B4SC83.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 324925.Ppha_0330.

    Protein family/group databases

    CAZyi GT5. Glycosyltransferase Family 5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACF42663 ; ACF42663 ; Ppha_0330 .
    GeneIDi 6460881.
    KEGGi pph:Ppha_0330.
    PATRICi 22901094. VBIPelPha134556_0342.

    Phylogenomic databases

    eggNOGi COG0297.
    HOGENOMi HOG000294940.
    KOi K00703.
    OMAi HEMVQNC.
    OrthoDBi EOG6JTC6Z.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci PPHA324925:GHBF-343-MONOMER.

    Family and domain databases

    HAMAPi MF_00484. Glycogen_synth.
    InterProi IPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view ]
    Pfami PF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02095. glgA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Pelodictyon phaeoclathratiforme BU-1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F.
      , Overmann J., Bryant D.A., Richardson P.
      Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 5477 / BU-1.

    Entry informationi

    Entry nameiGLGA_PELPB
    AccessioniPrimary (citable) accession number: B4SC83
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3