B4S9S6 (B4S9S6_PELPB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Polyphosphate kinase RuleBase RU003800 HAMAP-Rule MF_00347
EC=2.7.4.1 RuleBase RU003800 HAMAP-Rule MF_00347

Alternative name(s):
ATP-polyphosphate phosphotransferase HAMAP-Rule MF_00347
Polyphosphoric acid kinase HAMAP-Rule MF_00347

Gene names

Name:	ppk HAMAP-Rule MF_00347
Ordered Locus Names:	Ppha_1358

Organism

Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) [Complete proteome] [HAMAP] EMBL ACF43622.1

Taxonomic identifier

324925 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Pelodictyon › Pelodictyon phaeoclathratiforme

Protein attributes

Sequence length	708 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) By similarity. RuleBase RU003800 HAMAP-Rule MF_00347
Catalytic activity	ATP + (phosphate)(n) = ADP + (phosphate)(n+1). RuleBase RU003800 HAMAP-Rule MF_00347 SAAS SAAS003414
Post-translational modification	An intermediate of this reaction is the autophosphorylated ppk in which a phosphate is covalently linked to histidine residues through a N-P bond By similarity. RuleBase RU003800 HAMAP-Rule MF_00347
Sequence similarities	Belongs to the polyphosphate kinase family. RuleBase RU003800 HAMAP-Rule MF_00347 Contains 1 PLD phosphodiesterase domain. HAMAP-Rule MF_00347

Ontologies

Keywords
Ligand	ATP-binding SAAS SAAS003414 HAMAP-Rule MF_00347 Nucleotide-binding
Molecular function	Kinase SAAS SAAS003414 HAMAP-Rule MF_00347 EMBL ACF43622.1 Transferase
PTM	Phosphoprotein RuleBase RU003800 SAAS SAAS003414 HAMAP-Rule MF_00347
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	polyphosphate biosynthetic process Inferred from electronic annotation. Source: HAMAP
Cellular_component	polyphosphate kinase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW polyphosphate kinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Domain	608 – 638	31	PLD phosphodiesterase By similarity HAMAP-Rule MF_00347
Sites
	Active site	456	1	Phosphohistidine intermediate By similarity HAMAP-Rule MF_00347
	Active site	475	1	Phosphohistidine intermediate By similarity HAMAP-Rule MF_00347

Sequences

	Sequence		Length	Mass (Da)
	B4S9S6 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: 4600B629C2B48391	FASTA	708	80,738
	10 20 30 40 50 60 MTLFMQTGNK ENVKVQAAPD FSDTSLYVNR ELSWIYFNQR VLHEALDPEA HPLLDRVKFI 70 80 90 100 110 120 SIFSSNLDEY FMIRVAGIED QYEAGIQDRT IDGHTPFEQL EKIRMMVLQQ LSERNKCFYH 130 140 150 160 170 180 DLVPALQQQG ILFLRVSELS VLQQKALSHY FRKEIYPVLT PLAFDTGHPF PFMSNLSLNL 190 200 210 220 230 240 AVELEDEESS TLKFARVKVP SILPRLLQLN AIKGFNDDGI IRFIWLEDLV EHNLAQLFPK 250 260 270 280 290 300 MKIIQSHLFR LIRDADIEIE EDEAGDLLET IEQGIRSQRY GKVVRLDITP AMPLSVRKLL 310 320 330 340 350 360 MKNLEVTERN VYEIDGALGL GCLLDLLKID RPELKDEPFV PGNRIAEQFN NDIFSAIKAK 370 380 390 400 410 420 DQLLYHPYDS FQPVVDFISQ AAIDPDVLSI KQTLYRVGSN SPIVQALMKA AEEGKQVAVL 430 440 450 460 470 480 VELKARFDEE NNIVWARALE DVGAHVAYGL PGLKTHAKLT LIVRREQQKL KRYLHLGTGN 490 500 510 520 530 540 YNPATGKIYT DYSLFTANEQ LANDVAELFN ALTGYSKHTE YRKLLVSPIN TRKRIIEMID 550 560 570 580 590 600 REIEWNRKES KGRIIMKMNA LVDAKTIRAL YRASCEGVKI DLIIRGICCL KPGIPGVSEN 610 620 630 640 650 660 IRVISVIGRF LEHSRAYFFQ NGGKGELYLG SADIMPRNLD DRVETLFPVF DKAFIQVVKS 670 680 690 700 DLDLILSDNV KAWQMNAEGI YSKISNDAPE VDSQALFLSR ATLKKKAL

References

[1]

"Complete sequence of Pelodictyon phaeoclathratiforme BU-1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F. , Overmann J., Bryant D.A., Richardson P. Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 5477 / BU-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001110 Genomic DNA. Translation: ACF43622.1.
RefSeq	YP_002018239.1. NC_011060.1.
3D structure databases
ProteinModelPortal	B4S9S6.
ModBase	Search...
Protein-protein interaction databases
STRING	324925.Ppha_1358.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACF43622; ACF43622; Ppha_1358.
GeneID	6461294.
KEGG	pph:Ppha_1358.
PATRIC	22903294. VBIPelPha134556_1425.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0855.
HOGENOM	HOG000248948.
KO	K00937.
OMA	LSQLQFN.
ProtClustDB	PRK05443.
Enzyme and pathway databases
BioCyc	PPHA324925:GHBF-1386-MONOMER.
Family and domain databases
Gene3D	3.30.1840.10. 1 hit.
HAMAP	MF_00347. Polyphosphate_kinase.
InterPro	IPR003414. PP_kinase. IPR024953. PP_kinase_middle. IPR025200. PPK_C_dom. IPR025198. PPK_N_dom. [Graphical view]
Pfam	PF02503. PP_kinase. 1 hit. PF13090. PP_kinase_C. 1 hit. PF13089. PP_kinase_N. 1 hit. [Graphical view]
PIRSF	PIRSF015589. PP_kinase. 1 hit.
SUPFAM	SSF140356. SSF140356. 1 hit.
TIGRFAMs	TIGR03705. poly_P_kin. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B4S9S6_PELPB

Accession

Primary (citable) accession number: B4S9S6

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)