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B4S3F6 (B4S3F6_PROA2) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.1.42 EMBL ACF46695.1
Gene names
Ordered Locus Names:Paes_1677 EMBL ACF46695.1
OrganismProsthecochloris aestuarii (strain DSM 271 / SK 413) [Complete proteome] [HAMAP] EMBL ACF46695.1
Taxonomic identifier290512 [NCBI]
Taxonomic lineageBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeProsthecochloris

Protein attributes

Sequence length739 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region130 – 1378Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3481Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5461Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5501Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1431Substrate By similarity PIRSR PIRSR009407-2
Binding site5451Substrate By similarity PIRSR PIRSR009407-2
Site2531Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4181Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
B4S3F6 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: D26FC43C6D4E343F

FASTA73981,028
        10         20         30         40         50         60 
MAKIIYTKID EAPALATYSL LPIIQAFTSG TGVEVETRDI SLAGRIIANF PDNLTPEQQI 

        70         80         90        100        110        120 
PDYLSELGEL AKTKEANIIK LPNISASIPQ LQAAIKELQS KGYNVPDYPE EPKNDAEKEI 

       130        140        150        160        170        180 
KVRYAKVLGS AVNPVLREGN SDRRAAASVK QYAQNNPHRL RAWESGSKAS VAYMESGDFY 

       190        200        210        220        230        240 
ETEKSATMNG ADSVRIEYVD GDGNVTVLKD SLSLLDGEVI DTSIMNVRKL RDFYAAQIER 

       250        260        270        280        290        300 
SKNDDMLLSL HLKATMMKVS DPIMFGHAVL VFYKDVFDKH GDTFKALGVN VNNGLGDVYA 

       310        320        330        340        350        360 
KIQSLPEDKR AEIEADIQAV YPSRPALAMV DSDKGITNLH VPNDIIIDAS MPVVIRDGGK 

       370        380        390        400        410        420 
MWGPDGELHD TTAMIPDRCY ATMYQEMIED CQKNGAYDVS TMGSVSNVGL MAQKAEEYGS 

       430        440        450        460        470        480 
HDKTFEAPGD GVIRVVDGSG KAMLEQVVET GDIYRMCQVK DAPIRDWVKL AVNRAKATGV 

       490        500        510        520        530        540 
PAVFWLDKER AHHVQLIEKV TAYLKEHDTE GLDIRIMSPV EAMRFSLERI RAGKDTISVT 

       550        560        570        580        590        600 
GNVLRDYLTD LFPILELGTS AKMLSIVPLM NGGGLFETGA GGSAPKHVQQ FLKEGHLRWD 

       610        620        630        640        650        660 
SLGEMLALGV SLEHLAAAFK NDKAQVLADT VDQAVGQYLE NRKSPSRKVN EIDNRGSHYY 

       670        680        690        700        710        720 
FALYWAQALA AQDKDQELKA KFAGIAESMA ASEAAIIDEL NAAQGSAVDV DGYFMPDDEK 

       730 
ASQAMRPSAT LNAIIDALK 

« Hide

References

[1]"Complete sequence of chromosome of Prosthecochloris aestuarii DSM 271."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Liu Z., Li T., Zhao F. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 271 / SK 413.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001108 Genomic DNA. Translation: ACF46695.1.
RefSeqYP_002016342.1. NC_011059.1.

3D structure databases

ProteinModelPortalB4S3F6.
SMRB4S3F6. Positions 3-738.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290512.Paes_1677.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACF46695; ACF46695; Paes_1677.
GeneID6460385.
KEGGpaa:Paes_1677.
PATRIC23043238. VBIProAes37017_1787.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2838.
HOGENOMHOG000240860.
KOK00031.
OMAYSMERAI.
OrthoDBEOG6DVJPP.

Enzyme and pathway databases

BioCycPAES290512:GHUT-1722-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB4S3F6_PROA2
AccessionPrimary (citable) accession number: B4S3F6
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 9, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)