Skip Header

Contribute Send feedback
Read comments (?) or add your own

B4RX40 (TAL_ALTMD) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Transaldolase

EC=2.2.1.2
Gene names
Name:tal
Ordered Locus Names:MADE_1015450
OrganismAlteromonas macleodii (strain DSM 17117 / Deep ecotype) [Complete proteome] [HAMAP]
Taxonomic identifier314275 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas

Protein attributes

Sequence length319 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway By similarity. HAMAP-Rule MF_00492

Catalytic activity

Sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate. HAMAP-Rule MF_00492

Pathway

Carbohydrate degradation; pentose phosphate pathway; D-glyceraldehyde 3-phosphate and beta-D-fructose 6-phosphate from D-ribose 5-phosphate and D-xylulose 5-phosphate (non-oxidative stage): step 2/3. HAMAP-Rule MF_00492

Subunit structure

Homodimer By similarity.

Subcellular location

Cytoplasm By similarity.

Sequence similarities

Belongs to the transaldolase family. Type 1 subfamily.

Ontologies

Keywords
   Biological processPentose shunt
   Cellular componentCytoplasm
   Molecular functionTransferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpentose-phosphate shunt

Inferred from electronic annotation. Source: HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionsedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 319319Transaldolase HAMAP-Rule MF_00492
PRO_1000126235

Sites

Active site1321 By similarity

Sequences

Sequence LengthMass (Da)Tools
B4RX40 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: C7AEDCB3EEEBB19F

FASTA31934,705
        10         20         30         40         50         60 
MSNQLASLRD ITTVVADTGD IDAIKKYQPV DATTNPSLLL KAAGLPQYAS LIDDAVAWAK 

        70         80         90        100        110        120 
LQSNDAEQQL TDASDKLAVA IGKEISGTIP GRISTEVDAR LSFDTAATIE KAERLVQLYE 

       130        140        150        160        170        180 
DAGIDKSRIL IKIASTWEGI QAAEALEKKG IQCNLTLLFS FAQAQACAEA GVYLISPFVG 

       190        200        210        220        230        240 
RILDWYKKAT GTESYAPDED PGVVSVTKIY NYYKEHGYKT VVMGASFRNI GEIQALAGCD 

       250        260        270        280        290        300 
RLTISPALLE ELANEPGDLE VKLKDNDATK TPGERLTESE FRWAMNEDAM ATEKLSEGIR 

       310 
NFAADQEKLE ATLREKLSA 

« Hide

References

[1]"Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
Ivars-Martinez E., Martin-Cuadrado A.-B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17117 / Deep ecotype.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001103 Genomic DNA. Translation: AEA99222.1.
RefSeqYP_004428220.1. NC_011138.2.

3D structure databases

ProteinModelPortalB4RX40.
SMRB4RX40. Positions 2-317.
ModBaseSearch...

Protein-protein interaction databases

STRING314275.MADE_03321.

Proteomic databases

PRIDEB4RX40.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA99222; AEA99222; MADE_1015450.
GeneID10558440.
KEGGamc:MADE_1015450.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0176.
KOK00616.
OMAEYKPQDA.
ProtClustDBPRK05269.

Enzyme and pathway databases

BioCycAMAC314275:GHA7-3123-MONOMER.
UniPathwayUPA00115; UER00414.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
HAMAPMF_00492. Transaldolase_1.
InterProIPR013785. Aldolase_TIM.
IPR001585. Transaldolase.
IPR004730. Transaldolase_1.
IPR018225. Transaldolase_AS.
[Graphical view]
PANTHERPTHR10683. PTHR10683. 1 hit.
PfamPF00923. Transaldolase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00874. talAB. 1 hit.
PROSITEPS01054. TRANSALDOLASE_1. 1 hit.
PS00958. TRANSALDOLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTAL_ALTMD
AccessionPrimary (citable) accession number: B4RX40
Secondary accession number(s): F2GD86
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 23, 2008
Last modified: April 3, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families