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Reviewed, UniProtKB/Swiss-Prot B4RX40 (TAL_ALTMD)

Last modified November 3, 2009. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Transaldolase
    EC=2.2.1.2
Gene names
Name: tal
Ordered Locus Names: MADE_03321
OrganismAlteromonas macleodii (strain DSM 17117 / Deep ecotype) [Complete proteome] [HAMAP]
Taxonomic identifier314275 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas

Protein attributes

Sequence length319 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway By similarity.

Catalytic activity

Sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate. HAMAP MF_00492

Pathway

Carbohydrate degradation; pentose phosphate pathway; D-glyceraldehyde 3-phosphate and beta-D-fructose 6-phosphate from D-ribose 5-phosphate and D-xylulose 5-phosphate (non-oxidative stage): step 2/3. HAMAP MF_00492

Subcellular location

Cytoplasm Probable.

Sequence similarities

Belongs to the transaldolase family. Type 1 subfamily.

Ontologies

Keywords
   Biological processPentose shunt
   Cellular componentCytoplasm
   Molecular functionTransferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpentose-phosphate shunt

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiontransaldolase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 319319Transaldolase HAMAP MF_00492
PRO_1000126235

Sites

Active site1321 By similarity

Sequences

Sequence LengthMass (Da)Tools
B4RX40-1 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: C7AEDCB3EEEBB19F

FASTA31934,705
        10         20         30         40         50         60 
MSNQLASLRD ITTVVADTGD IDAIKKYQPV DATTNPSLLL KAAGLPQYAS LIDDAVAWAK 

        70         80         90        100        110        120 
LQSNDAEQQL TDASDKLAVA IGKEISGTIP GRISTEVDAR LSFDTAATIE KAERLVQLYE 

       130        140        150        160        170        180 
DAGIDKSRIL IKIASTWEGI QAAEALEKKG IQCNLTLLFS FAQAQACAEA GVYLISPFVG 

       190        200        210        220        230        240 
RILDWYKKAT GTESYAPDED PGVVSVTKIY NYYKEHGYKT VVMGASFRNI GEIQALAGCD 

       250        260        270        280        290        300 
RLTISPALLE ELANEPGDLE VKLKDNDATK TPGERLTESE FRWAMNEDAM ATEKLSEGIR 

       310 
NFAADQEKLE ATLREKLSA 

« Hide

References

[1]"Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
Ivars-Martinez E., Martin-Cuadrado A.-B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
ISME J. 2:1194-1212(2008) [PubMed: 18670397] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

CP001103 Genomic DNA. Translation: ACG67613.1.
RefSeqYP_002127607.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID6777118.
GenomeReviewsGene locus MADE_03321 in contig CP001103_GR.
KEGGamc:MADE_03321.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAEYKPQDA.

Family and domain databases

HAMAPMF_00492.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR001585. Transaldolase.
IPR004730. Transaldolase_AB.
IPR018225. Transaldolase_AS.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PANTHERPTHR10683. Transaldolase. 1 hit.
PTHR10683:SF3. Transaldolase_AB. 1 hit.
PfamPF00923. Transaldolase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00874. talAB. 1 hit.
PROSITEPS01054. TRANSALDOLASE_1. 1 hit.
PS00958. TRANSALDOLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTAL_ALTMD
AccessionPrimary (citable) accession number: B4RX40
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 23, 2008
Last modified: November 3, 2009
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents