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B4RGF1 (B4RGF1_PHEZH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PHZ_c2448
OrganismPhenylobacterium zucineum (strain HLK1) [Complete proteome] [HAMAP]
Taxonomic identifier450851 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaePhenylobacterium

Protein attributes

Sequence length563 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B4RGF1 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 79627212E95343FC

FASTA56362,308
        10         20         30         40         50         60 
MRRGGSGRGP WGQTMTPVAI RARTSATTGG SVGVLKGLTA ILAGVCVLAG GAPATAQSRD 

        70         80         90        100        110        120 
QVLAAMKRAT TFMVETAAYN GGYVWSYTPD FSRRWGELEA KPTMVWVQPP GTATMGHLFL 

       130        140        150        160        170        180 
DAYHATGDDY YYRAAERAAE ALVWGQHPSG GWNYFIDFGG PASARDWYET VGKNAWRMEE 

       190        200        210        220        230        240 
FQHDWGNATF DDAGTSEAMQ FLLRLYVEKL DPRWKPALDR AIGFVLEAQY PVGGWPQRYP 

       250        260        270        280        290        300 
VKPKFEGDYT GYITFNDDVA GENIKFLTMV YQALGDERAL DAIRRAMTSF LVTQLGQPQP 

       310        320        330        340        350        360 
GWALQYTLDL QPAAARSYEP LALATHTTAN NLAQLMTFYE LTGDTRFLAR VGEGLDWLDK 

       370        380        390        400        410        420 
VRLPAPTADG RTHPTFIEIG TDRPLYVHRR GSNVVNGAYY VDYSPERPLA HYSAFRRIDE 

       430        440        450        460        470        480 
AGLRARYERL KATPGAEVSK DSPLKATNRV PLPRYFATRD LETSDLNVRA AVDEDRSVSA 

       490        500        510        520        530        540 
EKVRALIGGL NREGYWPTPL VAASIPYTGE RPPAQPDGDY ATTHVGDRTD TSPYPAANPQ 

       550        560 
PGISTGAYIQ NMTVLIDWLD QRR 

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References

[1]"Complete genome of Phenylobacterium zucineum - a novel facultative intracellular bacterium isolated from human erythroleukemia cell line K562."
Luo Y., Xu X., Ding Z., Liu Z., Zhang B., Yan Z., Sun J., Hu S., Hu X.
BMC Genomics 9:386-386(2008) [PubMed: 18700039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000747 Genomic DNA. Translation: ACG78857.1.
RefSeqYP_002131286.1. NC_011144.1.

3D structure databases

ProteinModelPortalB4RGF1.
ModBaseSearch...

Protein-protein interaction databases

STRINGB4RGF1.

Protein family/group databases

CAZyPL10. Polysaccharide Lyase Family 10.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6791969.
GenomeReviewsGene locus PHZ_c2448 in contig CP000747_GR.
KEGGpzu:PHZ_c2448.
PATRIC22928032. VBIPheZuc44517_3080.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG346183.
OMANGWRLEE.
ProtClustDBCLSK890739.

Family and domain databases

InterProIPR012669. Pectate_lyase.
[Graphical view]
PfamPF09492. Pec_lyase. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4RGF1_PHEZH
AccessionPrimary (citable) accession number: B4RGF1
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)