B4RFB8 (B4RFB8_PHEZH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Proline iminopeptidase RuleBase RU003421
EC=3.4.11.5 RuleBase RU003421

Gene names

Ordered Locus Names:

PHZ_c2278

Organism

Phenylobacterium zucineum (strain HLK1) [Complete proteome] [HAMAP]

Taxonomic identifier

450851 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Caulobacterales › Caulobacteraceae › Phenylobacterium

Protein attributes

Sequence length	330 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Release of N-terminal proline from a peptide. RuleBase RU003421
Sequence similarities	Belongs to the peptidase S33 family. RuleBase RU003421

Ontologies

Keywords
Molecular function	Aminopeptidase RuleBase RU003421 Hydrolase Protease
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminopeptidase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	125	1	Nucleophile By similarity PIRSR PIRSR006431-1
	Active site	281	1	By similarity PIRSR PIRSR006431-1
	Active site	309	1	Proton donor By similarity PIRSR PIRSR006431-1

Sequences

	Sequence		Length	Mass (Da)
	B4RFB8 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: D9E43D4DE59CF44C	FASTA	330	37,177
	10 20 30 40 50 60 MERNTPAPAV SSPQHRRGLF ADNEPFASGW LATGGPHEIF YEECGNPNGK PCVILHGGPG 70 80 90 100 110 120 GAINPTMRRF FDPAKWRMAL FDQRGCGRSR PNASLEDNTT WALIEDIERL REHLGVEKWC 130 140 150 160 170 180 VFGGSWGSTL ALAYAIKHPE RVESLVLRGI FLLTERELRW FYQDGASMLF PDAWQRFCAP 190 200 210 220 230 240 IPEAERGDMI AAYHKRLTHP DRGVQAEAAA AWSQWEGDTI SIRGPEARPS KFNEIDFAIA 250 260 270 280 290 300 FARIECHFFA NGGFFPSKNW ILENLDRMRG IPGWIVQGRF DVVTPMESAW RLKQGWPEAR 310 320 330 FEVVWDAGHA STEPGIVDAL VRATDQALKL

References

[1]

"Complete genome of Phenylobacterium zucineum - a novel facultative intracellular bacterium isolated from human erythroleukemia cell line K562." Luo Y., Xu X., Ding Z., Liu Z., Zhang B., Yan Z., Sun J., Hu S., Hu X. BMC Genomics 9:386-386(2008) [PubMed: 18700039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000747 Genomic DNA. Translation: ACG78688.1.
RefSeq	YP_002131117.1. NC_011144.1.
3D structure databases
ProteinModelPortal	B4RFB8.
ModBase	Search...
Protein-protein interaction databases
STRING	B4RFB8.
Protein family/group databases
MEROPS	S33.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6791799.
GenomeReviews	Gene locus PHZ_c2278 in contig CP000747_GR.
KEGG	pzu:PHZ_c2278.
PATRIC	22927654. VBIPheZuc44517_2891.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG677789.
OMA	AELDWYY.
ProtClustDB	CLSK890304.
Family and domain databases
InterPro	IPR000073. AB_hydrolase_1. IPR005944. Pept_S33. IPR002410. Peptidase_S33. [Graphical view]
KO	K01259.
PANTHER	PTHR10992:SF12. PTHR10992:SF12. 1 hit.
Pfam	PF00561. Abhydrolase_1. 1 hit. [Graphical view]
PIRSF	PIRSF006431. Pept_S33. 1 hit.
PRINTS	PR00111. ABHYDROLASE. PR00793. PROAMNOPTASE.
TIGRFAMs	TIGR01249. Pro_imino_pep_1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B4RFB8_PHEZH

Accession

Primary (citable) accession number: B4RFB8

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)