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B4RDM1 (B4RDM1_PHEZH) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PHZ_c2000 EMBL ACG78411.1
OrganismPhenylobacterium zucineum (strain HLK1) [Complete proteome] [HAMAP] EMBL ACG78411.1
Taxonomic identifier450851 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaePhenylobacterium

Protein attributes

Sequence length428 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
B4RDM1 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 57A1F3A132DEACCA

FASTA42844,821
        10         20         30         40         50         60 
MSRNAELLSR RTAAVSRGVS TATPVFAARA ENAEIWDADG RRYVDFAGGI AVLNVGHRHP 

        70         80         90        100        110        120 
KVIEAVRAQL DAYTHTAFQV MAYEPYIELA ERLNALAPFK GPAKTLFFTT GAEAVENAVK 

       130        140        150        160        170        180 
IARVATGRTA VIAFTGAFHG RTMLTMGLTG KVAPYKKNFG PSPAELYHLP FPGSRAGVSV 

       190        200        210        220        230        240 
DDTLRALDLL FAADVAPDRV AAIIIEPVQG EGGFNPAPVE LMTALRRVCD EHGILLIADE 

       250        260        270        280        290        300 
VQTGFARTGK MFGIEHYPVE PDLVPVAKSL AGGFPLSGVI GRADLMDVVD PGGLGGTYGG 

       310        320        330        340        350        360 
SPVACAAALA VLDVIAEEGL LERAGAIGSA MRRRLSAIAA RNDVAPISEP RGPGAMVAFD 

       370        380        390        400        410        420 
MLKSRGGDEP DGAAAKAVVS RALDAGLVLL SCGRYGETIR LLVPLTVSDE VLAEGMDILE 


GALRDVAP 

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References

[1]"Complete genome of Phenylobacterium zucineum - a novel facultative intracellular bacterium isolated from human erythroleukemia cell line K562."
Luo Y., Xu X., Ding Z., Liu Z., Zhang B., Yan Z., Sun J., Hu S., Hu X.
BMC Genomics 9:386-386(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HLK1 EMBL ACG78411.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000747 Genomic DNA. Translation: ACG78411.1.
RefSeqYP_002130840.1. NC_011144.1.

3D structure databases

ProteinModelPortalB4RDM1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING450851.PHZ_c2000.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACG78411; ACG78411; PHZ_c2000.
GeneID6791517.
KEGGpzu:PHZ_c2000.
PATRIC22926996. VBIPheZuc44517_2566.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK07250.
OMANLCAEAN.
OrthoDBEOG6QVRHN.
ProtClustDBCLSK971284.

Enzyme and pathway databases

BioCycPZUC450851:GHUG-2031-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4RDM1_PHEZH
AccessionPrimary (citable) accession number: B4RDM1
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 11, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)