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Protein

Glutamate racemase

Gene

murI

Organism
Phenylobacterium zucineum (strain HLK1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Provides the (R)-glutamate required for cell wall biosynthesis.UniRule annotation

Catalytic activityi

L-glutamate = D-glutamate.UniRule annotation

Pathwayi: peptidoglycan biosynthesis

This protein is involved in the pathway peptidoglycan biosynthesis, which is part of Cell wall biogenesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway peptidoglycan biosynthesis and in Cell wall biogenesis.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei70Proton donor/acceptorUniRule annotation1
Active sitei206Proton donor/acceptorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Cell shape, Cell wall biogenesis/degradation, Peptidoglycan synthesis

Enzyme and pathway databases

UniPathwayiUPA00219.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate racemaseUniRule annotation (EC:5.1.1.3UniRule annotation)
Gene namesi
Name:murIUniRule annotation
Ordered Locus Names:PHZ_c0121
OrganismiPhenylobacterium zucineum (strain HLK1)
Taxonomic identifieri450851 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaePhenylobacterium
Proteomesi
  • UP000001868 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001140561 – 283Glutamate racemaseAdd BLAST283

Interactioni

Protein-protein interaction databases

STRINGi450851.PHZ_c0121.

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni7 – 8Substrate bindingUniRule annotation2
Regioni39 – 40Substrate bindingUniRule annotation2
Regioni71 – 72Substrate bindingUniRule annotation2
Regioni207 – 208Substrate bindingUniRule annotation2

Sequence similaritiesi

Belongs to the aspartate/glutamate racemases family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105F03. Bacteria.
COG0796. LUCA.
HOGENOMiHOG000262396.
KOiK01776.
OMAiELLETCM.
OrthoDBiPOG091H00P1.

Family and domain databases

Gene3Di3.40.50.1860. 1 hit.
HAMAPiMF_00258. Glu_racemase. 1 hit.
InterProiIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR004391. Glu_race.
[Graphical view]
PfamiPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMiSSF53681. SSF53681. 2 hits.

Sequencei

Sequence statusi: Complete.

B4RCD6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIGVFDSGV GGLTVHHRLV ERFPDADFVY LADQANAPYG GRPGEEIVEL
60 70 80 90 100
TKAGCIRLFE AGCDLVVLAC NTAASVALRR LQQTWLPGYR RETGRALNVL
110 120 130 140 150
GIVVPTIEAA TGLPWEHEAE RRGEKVEKLD ILGVFSTPAT ARSRVYEIEI
160 170 180 190 200
DKRRQDVAVF SEPCPELARM IEAGAPREEL KAVIEGHVQA LRTRIGRAPD
210 220 230 240 250
RAILGCTHYE IVADLFREAL PPGTPLIRQP EATADALARY LDRHPEFDPG
260 270 280
RSGLRRFLTT GEPGAQNSLV ETFWGGPLSF EPA
Length:283
Mass (Da):31,045
Last modified:September 23, 2008 - v1
Checksum:i68622AD5329B617E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000747 Genomic DNA. Translation: ACG76535.1.
RefSeqiWP_012520683.1. NC_011144.1.

Genome annotation databases

EnsemblBacteriaiACG76535; ACG76535; PHZ_c0121.
KEGGipzu:PHZ_c0121.
PATRICi22922754. VBIPheZuc44517_0474.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000747 Genomic DNA. Translation: ACG76535.1.
RefSeqiWP_012520683.1. NC_011144.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi450851.PHZ_c0121.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACG76535; ACG76535; PHZ_c0121.
KEGGipzu:PHZ_c0121.
PATRICi22922754. VBIPheZuc44517_0474.

Phylogenomic databases

eggNOGiENOG4105F03. Bacteria.
COG0796. LUCA.
HOGENOMiHOG000262396.
KOiK01776.
OMAiELLETCM.
OrthoDBiPOG091H00P1.

Enzyme and pathway databases

UniPathwayiUPA00219.

Family and domain databases

Gene3Di3.40.50.1860. 1 hit.
HAMAPiMF_00258. Glu_racemase. 1 hit.
InterProiIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR004391. Glu_race.
[Graphical view]
PfamiPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMiSSF53681. SSF53681. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiMURI_PHEZH
AccessioniPrimary (citable) accession number: B4RCD6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: September 23, 2008
Last modified: November 2, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.