Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B4RBB1 (B4RBB1_PHEZH) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:PHZ_c3347 EMBL ACG79756.1
OrganismPhenylobacterium zucineum (strain HLK1) [Complete proteome] [HAMAP] EMBL ACG79756.1
Taxonomic identifier450851 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaePhenylobacterium

Protein attributes

Sequence length540 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B4RBB1 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 81A82C386117DB45

FASTA54061,398
        10         20         30         40         50         60 
MRAFAELLDR LSLTPSRNAK LTLVRDYLRE TPDPHRGWAL AALTGDLTFD AAKPTFIRKA 

        70         80         90        100        110        120 
IEARMDPQLF WWSYDYVGDL AEAVSLCWPR RPGANREPDL AEVVEGLRDA SRAEVQGLIE 

       130        140        150        160        170        180 
GWLDALPDPR ERWALLKLMT RELRVGLTAR LAKRAAAEMG GVDPAEIEEL WHALHPPYED 

       190        200        210        220        230        240 
LFAWLEGRSE KPSSENPGRF RPVMLAQAID EAVDFARLDP ADYAAEWKWD GIRVQAVHEG 

       250        260        270        280        290        300 
GVRRLYTRTG DDISRTFPDI LGALEREGVL DGELLVVRDG RVASFADLQQ RLNRKAVDAK 

       310        320        330        340        350        360 
LLAAYPAGIR AYDLLQEGEE DLRPLPFAER RQRLEAFVAR EASPRIDLSP MQPFDTWADL 

       370        380        390        400        410        420 
TQLRASPPAG DAQIAEGVML KRWDSIYEAG RPKGPWFKWK RDPFLVDAVL MYAQRGHGKR 

       430        440        450        460        470        480 
SSFYSDYTFG VWCDDPLGKR VLTPVGKAYF GFTDEELKQI DKFVRDHTVE RFGPVRAVRA 

       490        500        510        520        530        540 
EPHAGLVFEV AFEGLQRSSR HKSGVAMRFP RISRIRWDKP PGEADELATL ERLLERMEAR 

« Hide

References

[1]"Complete genome of Phenylobacterium zucineum - a novel facultative intracellular bacterium isolated from human erythroleukemia cell line K562."
Luo Y., Xu X., Ding Z., Liu Z., Zhang B., Yan Z., Sun J., Hu S., Hu X.
BMC Genomics 9:386-386(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HLK1 EMBL ACG79756.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000747 Genomic DNA. Translation: ACG79756.1.
RefSeqYP_002132185.1. NC_011144.1.

3D structure databases

ProteinModelPortalB4RBB1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING450851.PHZ_c3347.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACG79756; ACG79756; PHZ_c3347.
GeneID6789298.
KEGGpzu:PHZ_c3347.
PATRIC22930060. VBIPheZuc44517_4086.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGQPYPFF.
OrthoDBEOG6Q8HXT.
ProtClustDBPRK09247.

Enzyme and pathway databases

BioCycPZUC450851:GHUG-3390-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4RBB1_PHEZH
AccessionPrimary (citable) accession number: B4RBB1
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 11, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)