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B4R564

- B4R564_DROSI

UniProt

B4R564 - B4R564_DROSI

Protein
Submitted name:

HDAC6

Gene

HDAC6

Organism
Drosophila simulans (Fruit fly)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. zinc ion binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    HDAC6Imported
    Gene namesi
    Name:HDAC6Imported
    Synonyms:Dsim\HDAC6Imported
    ORF Names:Dsim_GD17207Imported, GD17207Imported
    OrganismiDrosophila simulans (Fruit fly)Imported
    Taxonomic identifieri7240 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
    ProteomesiUP000000304: Unassembled WGS sequence

    Organism-specific databases

    FlyBaseiFBgn0068659. Dsim\HDAC6.

    Structurei

    3D structure databases

    ProteinModelPortaliB4R564.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK11407.
    OrthoDBiEOG7992PT.
    PhylomeDBiB4R564.

    Family and domain databases

    Gene3Di3.30.40.10. 1 hit.
    3.40.800.20. 2 hits.
    InterProiIPR000286. His_deacetylse.
    IPR023801. His_deacetylse_dom.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR001607. Znf_UBP.
    [Graphical view]
    PANTHERiPTHR10625. PTHR10625. 1 hit.
    PfamiPF00850. Hist_deacetyl. 1 hit.
    PF02148. zf-UBP. 1 hit.
    [Graphical view]
    PRINTSiPR01270. HDASUPER.
    SMARTiSM00290. ZnF_UBP. 1 hit.
    [Graphical view]
    PROSITEiPS50271. ZF_UBP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    B4R564-1 [UniParc]FASTAAdd to Basket

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    SPPIVTRRGA QQAKIQTRAM ASKSKTGTPG APTAAGGSAG GISSSSGSIS    50
    GGFNTADPRK TNKPSAALLE AKRRARNNML KNQGCGSQES VTDIFQNAVN 100
    SKSMVRKPTA LIYDESMSQH CCLWDKEHYE CPERFTRVLE RCRELNLTER 150
    CLELPSRSAT KDEILRLHTE EHFERLKETS GIRDDERMEE LSSRYDSIYI 200
    HPPSRIQHIH KMHDDYGLLT QMKQLSARAA TTDEVCLAHT RAHVNTVRRL 250
    LGREPKELHD AAGVYNSVYL HPRTFDCAVL AAGSVLQAVD SVLRGESRSG 300
    ICNVRPPGHH AEQDHPHGFC IFNNVAIAAQ YAIRDFGLER VLIVDWDVHH 350
    GNGTQHIFES NPKVLYISLH RYEHGSFFPK GPDGNFDVVG KGAGRGFNVN 400
    IPWNKKGMGD LEYALAFQQL VMPIAYEFNP QLVLVSAGFD AAIGDPLGGC 450
    KVTPEGYGML THWLSALASG RIIVCLEGGY NVNSISYAMT MCTKTLLGDP 500
    VPTPQLGATA LQKPPTVAFQ SCVESLQLCL QVQRTHWRSL EFVGRRLPRD 550
    PVVGENNNED FLTASLRHLN ISNDDATVAA SGPAVDRPDC GDERPSGSKP 600
    KVKVKTLSDY LADNKEALEQ SEMFAVYPLK TCPHLRLLRP EEAPRSLDSR 650
    AECSVCGSTG ENWVCLSCRH VACGRYVNAH MEQHSVEEQH PLAMSTADLS 700
    VWCYACSAYV DHPRLYAYLN PLHVDKFQEP MAWTHGCACR EDGCYATGPD 750
    GRDEDDENND DDNVAGSSIC LRLERNN 777
    Length:777
    Mass (Da):85,842
    Last modified:September 23, 2008 - v1
    Checksum:i2EA879D7E42FA3CE
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000366 Genomic DNA. Translation: EDX17965.1.
    RefSeqiXP_002106992.1. XM_002106956.1.

    Genome annotation databases

    EnsemblMetazoaiFBtr0217117; FBpp0215609; FBgn0068659.
    GeneIDi6726010.
    KEGGidsi:Dsim_GD17207.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000366 Genomic DNA. Translation: EDX17965.1 .
    RefSeqi XP_002106992.1. XM_002106956.1.

    3D structure databases

    ProteinModelPortali B4R564.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai FBtr0217117 ; FBpp0215609 ; FBgn0068659 .
    GeneIDi 6726010.
    KEGGi dsi:Dsim_GD17207.

    Organism-specific databases

    FlyBasei FBgn0068659. Dsim\HDAC6.

    Phylogenomic databases

    KOi K11407.
    OrthoDBi EOG7992PT.
    PhylomeDBi B4R564.

    Family and domain databases

    Gene3Di 3.30.40.10. 1 hit.
    3.40.800.20. 2 hits.
    InterProi IPR000286. His_deacetylse.
    IPR023801. His_deacetylse_dom.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR001607. Znf_UBP.
    [Graphical view ]
    PANTHERi PTHR10625. PTHR10625. 1 hit.
    Pfami PF00850. Hist_deacetyl. 1 hit.
    PF02148. zf-UBP. 1 hit.
    [Graphical view ]
    PRINTSi PR01270. HDASUPER.
    SMARTi SM00290. ZnF_UBP. 1 hit.
    [Graphical view ]
    PROSITEi PS50271. ZF_UBP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Evolution of genes and genomes on the Drosophila phylogeny."
      Drosophila 12 genomes consortium
      Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MixedImported.

    Entry informationi

    Entry nameiB4R564_DROSI
    AccessioniPrimary (citable) accession number: B4R564
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3