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B4QSV9 (B4QSV9_DROSI) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length362 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
B4QSV9 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 75D9993C9764B6FF

FASTA36240,952
        10         20         30         40         50         60 
MASKGWHNED NKLDTFRRIC DEIAGESSYL KKAEKLQRFF EKGSSGKGFK GDTLLWVQFL 

        70         80         90        100        110        120 
IPAANQRVYN LQNKALIKLF SRIFNADQQQ MHLDLEQDGD VSETLRKHFA ASKKLKPQAQ 

       130        140        150        160        170        180 
SKLYLQEVEE MLLKLVERTK EDEQTDLLQK LCSKATDLDL RTFIRLVKHD LRINARARHI 

       190        200        210        220        230        240 
LDAFGPDAYP TYQSSRDLVA IVGQFAGKEN KKDASSAVKK VKKTNSSGIQ VMTPISPMLA 

       250        260        270        280        290        300 
SPCKSVEEAF KKSPTGLYSE IKYDGERVQI HKQGNDFKFF SRNLKPVVDH KIRDLKKYIP 

       310        320        330        340        350        360 
LAFPGGGKMI LDSEIILVDT DTGALLPFGS LGAHKKHTFT NAAVCLFVFD CILYDGEDLT 


QL 

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References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Mixed EMBL EDX13219.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000364 Genomic DNA. Translation: EDX13219.1.
RefSeqXP_002103716.1. XM_002103680.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0220481; FBpp0218973; FBgn0192039.
GeneID6728368.
KEGGdsi:Dsim_GD20571.

Organism-specific databases

FlyBaseFBgn0192039. Dsim\GD20571.

Phylogenomic databases

KOK10776.
OrthoDBEOG7BKCT2.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4QSV9_DROSI
AccessionPrimary (citable) accession number: B4QSV9
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 11, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)