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B4QB17 (B4QB17_DROSI) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length713 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
B4QB17 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 3EAA7852A2B47DAD

FASTA71381,123
        10         20         30         40         50         60 
MQKSITSFFK KKSDATDSPS PPKKVPKIDA KTELPDEPHI KSESASPETK PKVEPMSVDS 

        70         80         90        100        110        120 
EEKTSPVKNV KKEPKDTVDK TTDKKVTTIG LNSTSASKED AENYDPSADS YHPLKNAYWK 

       130        140        150        160        170        180 
DKKVTPYLAL ARTFQVIEET KGRLKMIDTL SNFFCSVMLV SPEDLVPSVY LSINQLAPAY 

       190        200        210        220        230        240 
EGMELGVAET TLMKAICKAT GRNLAHIKSQ THLIGDLGIV AEQSRVSQRM MFQPAPLNVR 

       250        260        270        280        290        300 
DVFRKLREIA KISGQSKMDM VYNMFVACRL SEARFFIRSL IGKLRIGMQS RVCSQRWPLG 

       310        320        330        340        350        360 
CQCPNYDIII PAILKYDIKE LQERCPMHPG MPLRPMLAQP TKGVHEVFER FGGMQITCEW 

       370        380        390        400        410        420 
KYDGERAQIH RNEKGEISIF SRNSENNTAK YPDLIARSTG LLKGDVKSYI IDSEIVAWDV 

       430        440        450        460        470        480 
ERKQILPFQV LSTRKRKNVD IEEIKVQVCV YIFDLLYING TALVTKNLSE RRKLLLEHFQ 

       490        500        510        520        530        540 
EVEGEWKFAT ALDTNDIDEV QQFLEESIKG NCEGLMVKTL DEEATYEIAK RSRNWLKLKK 

       550        560        570        580        590        600 
DYLSNVGDSL DLVVIGGYKG KGRRTGTYGG FLLACYDTEN EEYQSICKIG TGFTDEDLQT 

       610        620        630        640        650        660 
HSEFLGKHVT SAAKSYYRYD PSLEPDHWFE PVQVWEVKCA DLSLSPIHRA AIGIVDGERG 

       670        680        690        700        710 
ISLRFPRFIR IRDDKNSENA TDANQVAHMY QSQDQVKNNQ KSSTQMEMED EFY 

« Hide

References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Mixed EMBL EDX08454.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000362 Genomic DNA. Translation: EDX08454.1.
RefSeqXP_002082869.1. XM_002082833.1.

3D structure databases

ProteinModelPortalB4QB17.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0211716; FBpp0210208; FBgn0183545.
GeneID6735960.
KEGGdsi:Dsim_GD11806.

Organism-specific databases

FlyBaseFBgn0183545. Dsim\GD11806.

Phylogenomic databases

KOK10747.
OrthoDBEOG7RFTGN.

Family and domain databases

Gene3D1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4QB17_DROSI
AccessionPrimary (citable) accession number: B4QB17
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 11, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)