SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

B4QB17

- B4QB17_DROSI

UniProt

B4QB17 - B4QB17_DROSI

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

DNA ligase

Gene
Dsim\GD11806, Dsim_GD11806, GD11806
Organism
Drosophila simulans (Fruit fly)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
Name:Dsim\GD11806Imported
ORF Names:Dsim_GD11806Imported, GD11806Imported
OrganismiDrosophila simulans (Fruit fly)Imported
Taxonomic identifieri7240 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
ProteomesiUP000000304: Unassembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0183545. Dsim\GD11806.

Structurei

3D structure databases

ProteinModelPortaliB4QB17.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK10747.
OrthoDBiEOG7RFTGN.
PhylomeDBiB4QB17.

Family and domain databases

Gene3Di1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4QB17-1 [UniParc]FASTAAdd to Basket

« Hide

MQKSITSFFK KKSDATDSPS PPKKVPKIDA KTELPDEPHI KSESASPETK    50
PKVEPMSVDS EEKTSPVKNV KKEPKDTVDK TTDKKVTTIG LNSTSASKED 100
AENYDPSADS YHPLKNAYWK DKKVTPYLAL ARTFQVIEET KGRLKMIDTL 150
SNFFCSVMLV SPEDLVPSVY LSINQLAPAY EGMELGVAET TLMKAICKAT 200
GRNLAHIKSQ THLIGDLGIV AEQSRVSQRM MFQPAPLNVR DVFRKLREIA 250
KISGQSKMDM VYNMFVACRL SEARFFIRSL IGKLRIGMQS RVCSQRWPLG 300
CQCPNYDIII PAILKYDIKE LQERCPMHPG MPLRPMLAQP TKGVHEVFER 350
FGGMQITCEW KYDGERAQIH RNEKGEISIF SRNSENNTAK YPDLIARSTG 400
LLKGDVKSYI IDSEIVAWDV ERKQILPFQV LSTRKRKNVD IEEIKVQVCV 450
YIFDLLYING TALVTKNLSE RRKLLLEHFQ EVEGEWKFAT ALDTNDIDEV 500
QQFLEESIKG NCEGLMVKTL DEEATYEIAK RSRNWLKLKK DYLSNVGDSL 550
DLVVIGGYKG KGRRTGTYGG FLLACYDTEN EEYQSICKIG TGFTDEDLQT 600
HSEFLGKHVT SAAKSYYRYD PSLEPDHWFE PVQVWEVKCA DLSLSPIHRA 650
AIGIVDGERG ISLRFPRFIR IRDDKNSENA TDANQVAHMY QSQDQVKNNQ 700
KSSTQMEMED EFY 713
Length:713
Mass (Da):81,123
Last modified:September 23, 2008 - v1
Checksum:i3EAA7852A2B47DAD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000362 Genomic DNA. Translation: EDX08454.1.
RefSeqiXP_002082869.1. XM_002082833.1.

Genome annotation databases

EnsemblMetazoaiFBtr0211716; FBpp0210208; FBgn0183545.
GeneIDi6735960.
KEGGidsi:Dsim_GD11806.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000362 Genomic DNA. Translation: EDX08454.1 .
RefSeqi XP_002082869.1. XM_002082833.1.

3D structure databases

ProteinModelPortali B4QB17.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai FBtr0211716 ; FBpp0210208 ; FBgn0183545 .
GeneIDi 6735960.
KEGGi dsi:Dsim_GD11806.

Organism-specific databases

FlyBasei FBgn0183545. Dsim\GD11806.

Phylogenomic databases

KOi K10747.
OrthoDBi EOG7RFTGN.
PhylomeDBi B4QB17.

Family and domain databases

Gene3Di 1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Evolution of genes and genomes on the Drosophila phylogeny."
    Drosophila 12 genomes consortium
    Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MixedImported.

Entry informationi

Entry nameiB4QB17_DROSI
AccessioniPrimary (citable) accession number: B4QB17
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: June 11, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi