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B4Q2E2 (B4Q2E2_DROYA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length918 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
B4Q2E2 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: D5E0480FD884E548

FASTA918105,150
        10         20         30         40         50         60 
MSVDIASTIK FRDICGLFEK LKASKKVANK EELLKSYYES FCRHRESFRR QTGLNDDQPE 

        70         80         90        100        110        120 
NGVSSFYSVL RLLLPGADTG RDTYGLQITA LGRLYIRVLQ LPTDSSDAIR LQHRTGNMYR 

       130        140        150        160        170        180 
DYGDVVYSVL KPRCFNPPSD LRLNHIHEML DTIANEDTEV KQQQLIRFTE QASPEEQKWL 

       190        200        210        220        230        240 
IRLLLKSLGL GIGEQKIFGV LHPKAQDIYQ RCSDLGHVCN LLADRTTDLD ASTSKDSKAA 

       250        260        270        280        290        300 
VKFVNLNSVI RPFHQIRPML CERFPGDIQE LMQSDVLYLE TKMDGERFQL HIDRGRFMYI 

       310        320        330        340        350        360 
SRNGVDYTKN FGHSYDHGTL TPKLRGLLPL GLESIILDGE MMVWDTNQLR FREKGENTDV 

       370        380        390        400        410        420 
KSLKPEGSWQ PCFVVYDLLY FNGQSLLDHT YIQRAYKLQK LIVEQSGVLQ LMRARKIGSV 

       430        440        450        460        470        480 
KEFNELFQQA LDSHAEGIVL KKQASRYQPG VRLGGGWYKD KADYIKGLIT EFDVLIIGAF 

       490        500        510        520        530        540 
YNRKRTFVDS FLLGVLQPAP PGSSNRPEVF SIGVVANNTK QRAVLNHTLK PHWHDVVNEP 

       550        560        570        580        590        600 
PPLWYHYKPK DRSGCPDLWI EPHNSVILQV KAADLAPNGA FFTRKSLHFP RTEMKRDDKP 

       610        620        630        640        650        660 
WNECMTLKEF NNLCDGSLAI KKLNKRQLRL EDVTTKRKQM RMTPSERSRL ALAVYEKRYV 

       670        680        690        700        710        720 
ANPSTSSSKL FDGLSFCILS GSAGRHSKHQ LQELAVKNGG CIVENPLPND PKCFCIAGDE 

       730        740        750        760        770        780 
TFLVRRLILQ KPRTCDIVRM EWLLRVCQKQ ELELRPRDII AATEPLQQDL AECFDRHGDS 

       790        800        810        820        830        840 
YSKDIANVQE LQDLLQDIHL TAENVVGISA SKVNALEDRL LDGKKNLNMF RHLNAYFYSP 

       850        860        870        880        890        900 
QGDELARLLF MQNGGRIVDD SDPQLNLGFI CMSSDIDNDH FEHWLRNHSK LSADKVVNSA 

       910 
WIHQSHREGL LLPMQCFV 

« Hide

References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Principles of genome evolution in the Drosophila melanogaster species group."
Ranz J.M., Maurin D., Chan Y.S., von Grotthuss M., Hillier L.W., Roote J., Ashburner M., Bergman C.M.
PLoS Biol. 5:E152-E152(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tai18E2 / Tucson 14021-0261.01.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000162 Genomic DNA. Translation: EDX01603.1.
RefSeqXP_002100495.1. XM_002100459.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7245.FBpp0261157.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0262665; FBpp0261157; FBgn0233691.
GeneID6524638.
KEGGdya:Dyak_GE16147.

Organism-specific databases

FlyBaseFBgn0233691. Dyak\GE16147.

Phylogenomic databases

eggNOGCOG1793.
KOK10777.
OrthoDBEOG7BKCT2.
PhylomeDBB4Q2E2.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4Q2E2_DROYA
AccessionPrimary (citable) accession number: B4Q2E2
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 9, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)