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B4PA92 (B4PA92_DROYA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length747 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
B4PA92 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: E04C6CA0EA0FB6EC

FASTA74784,685
        10         20         30         40         50         60 
MQKSITSFFK KQSDANDSAS PPKKVPKIDA KTELPDEPLI KSESASPETK AKVEPMSVDS 

        70         80         90        100        110        120 
EEKTSPVKNV KTEPKDVEDK TTDKKVTTIG LNSTSATKED MENYDPSADS YHPLKNAYWK 

       130        140        150        160        170        180 
DKKVTPYLAL ARTFQVIEET KGRLKMIDTL SNFFCSVMLV SPDDLVPSVY LSINQLAPAY 

       190        200        210        220        230        240 
EGLELGVAET TLMKAICKAT GRNLAHIKSQ THLIGDLGIV AEQSRVSQRM MFQPAPLNVR 

       250        260        270        280        290        300 
DVFRKLREIA KISGQSKMDQ VYNMFVACRS SEARFFIRSL IGKLRIGIAE QSLLTALAVG 

       310        320        330        340        350        360 
LVKKNHIDDC KASKVPEVYK DEIAETTLLL KTAYCQCPNY DIIIPAILKY DIKELQERCP 

       370        380        390        400        410        420 
MHPGMPLRPM LAQPTKGVHE VFERFGGMQI TCEWKYDGER AQIHRNEKGE ISIFSRNSEN 

       430        440        450        460        470        480 
NTAKYPDLIA RSAGLLKGDI KSYIIDSEIV AWDVERKQIL PFQVLSTRKR KNVDIEEIKV 

       490        500        510        520        530        540 
QVCVYIFDLL YINGTALVTK NLSERRKLLL EHFQEVEGEW KFATALDTND IDEVQQFLEE 

       550        560        570        580        590        600 
SIKGNCEGLM VKTLDEEATY EIAKRSRNWL KLKKDYLSNV GDSLDLVVIG GYKGKGRRTG 

       610        620        630        640        650        660 
TYGGFLLACY DTENEEYQSI CKIGTGFTDE DLQTHSEFLG KHVTSTAKSY YRYDPSLEPD 

       670        680        690        700        710        720 
HWFEPVQVWE VKCADLSLSP IHRAAIGIVD GERGISLRFP RFIRIRDDKN SENATDANQV 

       730        740 
AHMYQSQDQV KNNQKSSTQM EMEDEFY 

« Hide

References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tai18E2 / Tucson 14021-0261.01.
[2]"Principles of genome evolution in the Drosophila melanogaster species group."
Ranz J.M., Maurin D., Chan Y.S., von Grotthuss M., Hillier L.W., Roote J., Ashburner M., Bergman C.M.
PLoS Biol. 5:E152-E152(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000158 Genomic DNA. Translation: EDW92418.1.
RefSeqXP_002092706.1. XM_002092670.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7245.FBpp0259346.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0260854; FBpp0259346; FBgn0231950.
GeneID6531920.
KEGGdya:Dyak_GE14336.

Organism-specific databases

FlyBaseFBgn0231950. Dyak\GE14336.

Phylogenomic databases

eggNOGCOG1793.
KOK10747.
OrthoDBEOG7RFTGN.
PhylomeDBB4PA92.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4PA92_DROYA
AccessionPrimary (citable) accession number: B4PA92
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 9, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)