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B4NBE8 (B4NBE8_DROWI) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length796 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
B4NBE8 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 9A7EDCD0AE46B3E4

FASTA79690,397
        10         20         30         40         50         60 
MATPLQNEDN KLDTFRRICD EIASESSYLR KVERLEGFFK KGSKGTVFEG DFLLWVQFLI 

        70         80         90        100        110        120 
PGATQRVYNL QNKALIKLFS RILNSDQNQM QLDLEQDGDV SETLRKHFAA SAKLKPQTQS 

       130        140        150        160        170        180 
KLYLQEVDEL LRQLEQKTKE DDQTELLKEL CKKATELDLR TFIRLIKQDL RINARARHIL 

       190        200        210        220        230        240 
DAFGPLAYPA YQSSRDLTAI VQQFAGKAVK TQAKSPAKKL KTTTSAIQVM TPISPMLANA 

       250        260        270        280        290        300 
CKSVEEAFKK NPAGLFGEVK YDGERVQIHK KGKEFKFFSR NLKPVMDHKI KRLTEYIPRA 

       310        320        330        340        350        360 
FPGAGDMILD SEIILVDTET GALLPFGTLG AHKKHEYANA SVCLFVFDCI LYDGEDLMQL 

       370        380        390        400        410        420 
EFRKRREILE QNIEPIKSYV QLSESQFLKT KSELAMMTAK VLQANLEGVV LKNPNGTYQP 

       430        440        450        460        470        480 
GKRNWLKVKK DYLFDGKMAD TADLVVLGAW YGSGKKGGVL SIFLMGCYDP KDRLWKTVTK 

       490        500        510        520        530        540 
VHSGLDDSTN DEIHENLMKL TTRADANKTP NWLLCKKSLV PDVLAVDPQK MPVWEITGAE 

       550        560        570        580        590        600 
FTKSEAHTAA GVSIRFPRIT RLRSDKTSKE ANDLPHLLNL YEASKKNVNV DLLLANCDND 

       610        620        630        640        650        660 
KDGLEKKLAQ EKTPEKRKSL ENSAKKSKKS ISKEDEDSQC SSKMIKREVN KPSQKGLQYY 

       670        680        690        700        710        720 
FKPDKIQNNV KSELKTEVKT ELKTQVKSET HTAMEVDENT PKQVKSKLFS GLVAHFTKDA 

       730        740        750        760        770        780 
TKSKQMQEFV QHGGSLTTNT QKAALAFYNT NTSVNLAHLR PLYRRRCRHL TVSWLDRSIE 

       790 
TQTLQPYPLY AVLLKS 

« Hide

References

[1]"Evolution of genes and genomes on the Drosophila phylogeny."
Drosophila 12 genomes consortium
Nature 450:203-218(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tucson 14030-0811.24.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH964232 Genomic DNA. Translation: EDW81112.1.
RefSeqXP_002070126.1. XM_002070090.1.

3D structure databases

ProteinModelPortalB4NBE8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7260.FBpp0240337.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0241845; FBpp0240337; FBgn0213205.
GeneID6647378.
KEGGdwi:Dwil_GK11194.

Organism-specific databases

FlyBaseFBgn0213205. Dwil\GK11194.

Phylogenomic databases

eggNOGCOG1793.
InParanoidB4NBE8.
KOK10776.
OMANEDNKLD.
OrthoDBEOG7BKCT2.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 1 hit.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB4NBE8_DROWI
AccessionPrimary (citable) accession number: B4NBE8
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 11, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)